RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 JAM2P57087 298 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 BPIFB4P59827 614 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 DSG1Q02413 1049 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 TBX2Q13207 712 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 PTPN21Q16825 1174 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 PDE12Q6L8Q7 609 aaKnown RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 VPS52Q8N1B4 723 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 RBBP8NLQ8NC74 664 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 BAP1Q92560 729 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 SYN2Q92777 582 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 KAT5Q92993 513 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 ACBD6Q9BR61 282 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 VN1R3Q9BXE9 311 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 NT5C1AQ9BXI3 368 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 DDX43Q9NXZ2 648 aaKnown RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 CDH9Q9ULB4 789 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 KIAA1257Q9ULG3 409 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 BACE2Q9Y5Z0 518 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 COL4A4P53420 1690 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 AKR1B15C9JRZ8 316 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 FOXN3O00409 490 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 LPXNO60711 386 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 MFAP3LO75121 409 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 ARHGEF15O94989 841 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 CTSAP10619 480 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 KRT5P13647 590 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 FERP16591 822 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 CASP14P31944 242 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 KRT9P35527 623 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 SOX5P35711 763 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZNF132P52740 706 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 GSDMDP57764 484 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 TSPY1Q01534 308 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 SMARCB1Q12824 385 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 GPM6BQ13491 265 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 PSMD5Q16401 504 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 CTXN3Q4LDR2 81 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 SFMBT2Q5VUG0 894 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 TMEM270Q6UE05 265 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 CRYBG2Q8N1P7 616 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 RIN2Q8WYP3 895 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 TMEM176AQ96HP8 235 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 SYT15Q9BQS2 421 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 GPR88Q9GZN0 384 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 NGRNQ9NPE2 291 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 TLR9Q9NR96 1032 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 MRPL17Q9NRX2 175 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZNHIT6Q9NWK9 470 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 AIPL1Q9NZN9 384 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 AJAP1Q9UKB5 411 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 MTUS1Q9ULD2 1270 aa11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 TIMM13Q9Y5L4 95 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 RANBP2P49792 3224 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-204ENST00000578252 LRRC53A6NM62 1247 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 GGCXP38435 758 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 USP8P40818 1118 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 PTK2Q05397 1052 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 STILQ15468 1287 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 KIAA0319Q5VV43 1072 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 TMC7Q7Z402 723 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 OSTM1Q86WC4 334 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 OR8K1Q8NGG5 319 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 LNX1Q8TBB1 728 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 ARNTL2Q8WYA1 636 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 ALG13Q9NP73 1137 aaKnown RBP11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 FNIP2Q9P278 1114 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 IRAK3Q9Y616 596 aa11.91□□□□□ -0.5
TRAPPC8-204ENST00000578252 ATP8B3O60423 1300 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 MED7O43513 233 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 TBC1D4O60343 1298 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 GFPT2O94808 682 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PDGFRBP09619 1106 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 VDRP11473 427 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PTPN1P18031 435 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 GNA15P30679 374 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 NDUFV1P49821 464 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PDE6CP51160 858 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 RAD23BP54727 409 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 PTPN14Q15678 1187 aa11.9□□□□□ -0.5
TRAPPC8-204ENST00000578252 ASIC2Q16515 512 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms