RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 STRA6Q9BX79 667 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 TDP1Q9NUW8 608 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 GDAP2Q9NXN4 497 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 CCDC39Q9UFE4 941 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 ITGA11Q9UKX5 1188 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 TM4SF5O14894 197 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 PRAMEF12O95522 483 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 HMGA1P17096 107 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 DDIT3P35638 169 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 LHX1P48742 406 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 BRSK2Q8IWQ3 736 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 ATP2A3Q93084 1043 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 PYM1Q9BRP8 204 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 HPS4Q9NQG7 708 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 PPEF2O14830 753 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 APBB3O95704 486 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 PCSK1P29120 753 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 DMWDQ09019 674 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 Q6ZS52 159 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 OSCP1Q8WVF1 389 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 LPIN3Q9BQK8 851 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 GTSE1Q9NYZ3 720 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 ANGPTL2Q9UKU9 493 aa12.1□□□□□ -0.47
SMARCE1-214ENST00000578112 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 TRAV19A0A0A6YYK7 116 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 SOX9P48436 509 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 CYP4F8P98187 520 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 SPAG1Q07617 926 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 RAD51AP2Q09MP3 1159 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 ELF2Q15723 593 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 INTS6LQ5JSJ4 861 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 USP13Q92995 863 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 DUSP9Q99956 384 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 P2RY13Q9BPV8 354 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-214ENST00000578112 NPHP3-ACAD11A0A0J9YXS1 232 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 AXIN1O15169 862 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 PLCG1P19174 1290 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 ZNF77Q15935 545 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 C4orf50Q6ZRC1 276 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 TMEM150AQ86TG1 271 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 CD101Q93033 1021 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 PKMYT1Q99640 499 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.47
SMARCE1-214ENST00000578112 TMEM8BA6NDV4 472 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 HUS1O60921 280 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 CCDC192P0DO97 292 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 TXLNAP40222 546 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 EIF2DP41214 584 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 IFNAR2P48551 515 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 GUCY2FP51841 1108 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 MCM6Q14566 821 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 WSCD1Q658N2 575 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 VSTM1Q6UX27 236 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 STXBP4Q6ZWJ1 553 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 TTC9BQ8N6N2 239 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 ZMYND15Q9H091 742 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
SMARCE1-214ENST00000578112 GABRDO14764 452 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 SEC24BO95487 1268 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 NFATC1O95644 943 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 GJB2P29033 226 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 RBP5P82980 135 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 MTF1Q14872 753 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 CRELD2Q6UXH1 353 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 LIMS2Q7Z4I7 341 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 RASSF8Q8NHQ8 419 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 LRRC27Q9C0I9 530 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 ABI2Q9NYB9 513 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 ANKRD63C9JTQ0 380 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 BYSLQ13895 437 aaKnown RBP12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 PLK5Q496M5 336 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 LRRTM3Q86VH5 581 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 EFCAB13Q8IY85 973 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 ARRDC1-AS1Q9H2J1 176 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms