RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, human

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT20-205	ENST00000578009	BLOC1S4	Q9NUP1	217 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	EXOC1	Q9NV70	894 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	INTS13	Q9NVM9	706 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	ZNF112	Q9UJU3	913 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	DDX41	Q9UJV9	622 aa	Known RBP	5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	WASF3	Q9UPY6	502 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	MRPL11	Q9Y3B7	192 aa	Known RBP	5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	PAXBP1	Q9Y5B6	917 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	ABCB11	O95342	1321 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	ITIH6	Q6UXX5	1313 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	SYNRG	Q9UMZ2	1314 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	COL4A5	P29400	1685 aa		5.37	□□□□□ -1.55
IFT20-205	ENST00000578009	GOLGA6L9	A6NEM1	432 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	WDR46	O15213	610 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ARHGAP6	O43182	974 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	FOXS1	O43638	330 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	MARCH6	O60337	910 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	KIF20A	O95235	890 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	CNOT4	O95628	575 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	FGFR1OP	O95684	399 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	POLR2M	P0CAP2	368 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TGM1	P22735	817 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	RPA1	P27694	616 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	PRCP	P42785	496 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	SOX9	P48436	509 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	USP14	P54578	494 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ABHD18	Q0P651	414 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	IK	Q13123	557 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	RASA3	Q14644	834 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TPD52L1	Q16890	204 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TCP11X2	Q5H9J9	407 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	PHF19	Q5T6S3	580 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	CENPP	Q6IPU0	288 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TCTN3	Q6NUS6	607 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TTI2	Q6NXR4	508 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ARMCX5	Q6P1M9	558 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	RNF207	Q6ZRF8	634 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NIPA1	Q7RTP0	329 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	CCDC103	Q8IW40	242 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	CCAR2	Q8N163	923 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009		Q8N1Y9	231 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	PRPF38A	Q8NAV1	312 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NUDT10	Q8NFP7	164 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ERMN	Q8TAM6	284 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ETNPPL	Q8TBG4	499 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ACER1	Q8TDN7	264 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NELFB	Q8WX92	580 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	RAD54L	Q92698	747 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	STAM	Q92783	540 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NUDT11	Q96G61	164 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	LRRC37B	Q96QE4	947 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ADO	Q96SZ5	270 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NUP88	Q99567	741 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	NAA15	Q9BXJ9	866 aa	Known RBP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	TMEM39B	Q9GZU3	492 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	VEZT	Q9HBM0	779 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	RBPJL	Q9UBG7	517 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	FBXL7	Q9UJT9	491 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ADAM29	Q9UKF5	820 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	PPP2R3B	Q9Y5P8	575 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	ADAMTSL1	Q8N6G6	1762 aa		5.36	□□□□□ -1.55
IFT20-205	ENST00000578009	MYH8	P13535	1937 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	MYMK	A6NI61	221 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	DYNC1I1	O14576	645 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	MEFV	O15553	781 aa	Predicted RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	ZSCAN12	O43309	604 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	ICAM1	P05362	532 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	TPM1	P09493	284 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	NAT2	P11245	290 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	CASP1	P29466	404 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	CCT6A	P40227	531 aa	Known RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	ECI1	P42126	302 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	ECE1	P42892	770 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	GMPS	P49915	693 aa	Predicted RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	DNM2	P50570	870 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	HSD17B4	P51659	736 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	COPB1	P53618	953 aa	Known RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	ASIC1	P78348	528 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	LRRC63	Q05C16	580 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	CYP4F3	Q08477	520 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	SPIRE1	Q08AE8	756 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	KRT31	Q15323	416 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	SMN1	Q16637	294 aa	Known RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	KIAA1755	Q5JYT7	1200 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	FAM83B	Q5T0W9	1011 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	E4F1	Q66K89	784 aa	Predicted RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	HAUS3	Q68CZ6	603 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	KLHL10	Q6JEL2	608 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	XRRA1	Q6P2D8	792 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	MCF2L2	Q86YR7	1114 aa		5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.35	□□□□□ -1.55
IFT20-205	ENST00000578009	CNGA4	Q8IV77	575 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms