RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TRIM21P19474 475 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FGFR3P22607 806 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 WARSP23381 471 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BMPR1AP36894 532 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ZBED6P86452 979 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PAN2Q504Q3 1202 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 IQCEQ6IPM2 695 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 DDX53Q86TM3 631 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ARHGEF19Q8IW93 802 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 DRC7Q8IY82 874 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAM71AQ8IYT1 594 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SUSD6Q92537 303 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SENP8Q96LD8 212 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LSM14BQ9BX40 385 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LZTS1Q9Y250 596 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RNF225M0QZC1 329 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CYB561D2O14569 222 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TBC1D4O60343 1298 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HUS1O60921 280 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LHX1P48742 406 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ZNF132P52740 706 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 YWHAEP62258 255 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TNNC1P63316 161 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 APBA1Q02410 837 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KIAA0319Q5VV43 1072 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CRYBG2Q8N1P7 616 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KBTBD7Q8WVZ9 684 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 GPR62Q9BZJ7 368 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CACNG4Q9UBN1 327 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BARX2Q9UMQ3 279 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FHOD1Q9Y613 1164 aa11.89□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.511e-11■■■■■ 43.1
CDK5RAP3-204ENST00000577664 F8VZ95 297 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FOXN3O00409 490 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CILPO75339 1184 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SOD2P04179 222 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ADRB1P08588 477 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 IBSPP21815 317 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SDHBP21912 280 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FECHP22830 423 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CDK17Q00537 523 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 UBE3AQ05086 875 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DRAP1Q14919 205 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 GJB7Q6PEY0 223 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DSTYKQ6XUX3 929 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ZNF397Q8NF99 534 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 OR8K1Q8NGG5 319 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 WHAMMQ8TF30 809 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 BCL7CQ8WUZ0 217 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ANP32BQ92688 251 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KAT5Q92993 513 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RPGRIP1Q96KN7 1286 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ACBD6Q9BR61 282 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SDCBP2Q9H190 292 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CISHQ9NSE2 258 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 AJAP1Q9UKB5 411 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 KIAA1257Q9ULG3 409 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 L1RE1Q9UN81 338 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 POLIQ9UNA4 740 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 IRAK3Q9Y616 596 aa11.88□□□□□ -0.51
CDK5RAP3-204ENST00000577664 F8W810 466 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 GRM6O15303 877 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 LILRB3O75022 631 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 C1RP00736 705 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PAEPP09466 180 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 WEE2P0C1S8 567 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ODC1P11926 461 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CASP14P31944 242 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CLCN1P35523 988 aa11.87□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SOX5P35711 763 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms