RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 OTOP3Q7RTS5 596 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MED15Q96RN5 788 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 APOBEC3GQ9HC16 384 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ASB3Q9Y575 518 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PTPRDP23468 1912 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 VNN2O95498 520 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 RAP1GAPP47736 663 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PSMC1P62191 440 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 INCA1Q0VD86 236 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FAM171BQ6P995 826 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 LRRTM3Q86VH5 581 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 B3GALNT2Q8NCR0 500 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYCBPAPQ8TBZ2 947 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SEMA4DQ92854 862 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NT5C1BQ96P26 610 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PKMYT1Q99640 499 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GTF3C4Q9UKN8 822 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYH10P35580 1976 aa13.56□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYBPHLA2RUH7 354 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 HAPLN1P10915 354 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PTPN2P17706 415 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PTPN1P18031 435 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FSHRP23945 695 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 LMO2P25791 158 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 EEF1GP26641 437 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MAGEA11P43364 429 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CDH8P55286 799 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYL5Q02045 173 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TAF12Q16514 161 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MAN2A1Q16706 1144 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 VSTM1Q6UX27 236 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GRASPQ7Z6J2 395 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 RPGRIP1Q96KN7 1286 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NT5C1AQ9BXI3 368 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ELOVL4Q9GZR5 314 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SDCBP2Q9H190 292 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■□□ 19.2
CDK5RAP3-203ENST00000577442 ASAH2Q9NR71 780 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NOTCH4Q99466 2003 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GTPBP10A4D1E9 387 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ZNF197O14709 1029 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 HCRTO43612 131 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FGF19O95750 216 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TPM2P07951 284 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 RHOP08100 348 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CD58P19256 250 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 NDST1P52848 882 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CUL2Q13617 745 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CYP4A22Q5TCH4 519 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GET4Q7L5D6 327 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GJD3Q8N144 294 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CEP295NLQ96MC4 621 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ZFP37Q9Y6Q3 630 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-203ENST00000577442 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 TRIM66O15016 1216 aa13.53□□□□□ -0.24
CDK5RAP3-203ENST00000577442 ATP2C2O75185 946 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms