RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 PRLRP16471 622 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 BRD2P25440 801 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 SCNN1AP37088 669 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 GABRB2P47870 512 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 SLFN11Q7Z7L1 901 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 GPR65Q8IYL9 337 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 TDHQ8IZJ6 230 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 OR6B3Q8NGW1 331 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 TFAP2BQ92481 460 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 TWNKQ96RR1 684 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 ZBED2Q9BTP6 218 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 RC3H2Q9HBD1 1191 aaKnown RBP13.2□□□□□ -0.3
TSEN54-204ENST00000577197 ACP6Q9NPH0 428 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 INPP5FQ9Y2H2 1132 aa13.2□□□□□ -0.3
TSEN54-204ENST00000577197 A0A1W2PPC1 479 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 CASTOR2A6NHX0 329 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 OAZ2O95190 189 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 CASQ1P31415 396 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 GPD2P43304 727 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 BCAT1P54687 386 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 TIGD5Q53EQ6 642 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 DNTTIP2Q5QJE6 756 aaKnown RBP13.19□□□□□ -0.3
TSEN54-204ENST00000577197 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
TSEN54-204ENST00000577197 PLEKHA7Q6IQ23 1121 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 ARCQ7LC44 396 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 YME1L1Q96TA2 773 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 RAD9AQ99638 391 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 NAPGQ99747 312 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-204ENST00000577197 PACSIN1Q9BY11 444 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
TSEN54-204ENST00000577197 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 CES2O00748 559 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 DDHD2O94830 711 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ALDH2P05091 517 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 SLC8A3P57103 927 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF268Q14587 947 aaPredicted RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 NAA35Q5VZE5 725 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 FAM117BQ6P1L5 589 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 C1orf131Q8NDD1 294 aaKnown RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 SLC35G2Q8TBE7 412 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 FNIP1Q8TF40 1166 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 HSFY1Q96LI6 401 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 WDR24Q96S15 920 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 L2HGDHQ9H9P8 463 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 PARVAQ9NVD7 372 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
TSEN54-204ENST00000577197 DNAI1Q9UI46 699 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
TSEN54-204ENST00000577197 A0A0U1RQJ8 604 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 TLL1O43897 1013 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 MICAL2O94851 1124 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 EFEMP2O95967 443 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms