RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CCDC149Q6ZUS6 474 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 C8orf48Q96LL4 319 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 STK32BQ9NY57 414 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 DMTF1Q9Y222 760 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 A0A087WWL8 130 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 TRIAP1O43715 76 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 FOLR3P41439 243 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 VIPR2P41587 438 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 CACNB3P54284 484 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 KIAA0753Q2KHM9 967 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 ZNF783Q6ZMS7 281 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.58□□□□□ -1.36
NUP88-213ENST00000576862 DNAJC5GQ8N7S2 189 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 OR6B3Q8NGW1 331 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 LRTOMTQ8WZ04 291 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 SYNPO2LQ9H987 977 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 FOXJ2Q9P0K8 574 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 CPNE7Q9UBL6 633 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 TPCN1Q9ULQ1 816 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 TMX2Q9Y320 296 aa6.58□□□□□ -1.36
NUP88-213ENST00000576862 WDR27A2RRH5 827 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 VWC2LB2RUY7 222 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 PEX1O43933 1283 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 ATXN1LP0C7T5 689 aaKnown RBP6.57□□□□□ -1.36
NUP88-213ENST00000576862 MYF5P13349 255 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 SUMO3P55854 103 aaPredicted RBP6.57□□□□□ -1.36
NUP88-213ENST00000576862 LILRA4P59901 499 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 FAM193AP78312 1265 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 SLC13A2Q13183 592 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 SEMA5AQ13591 1074 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 IQCB1Q15051 598 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 OLFML1Q6UWY5 402 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 SLC15A4Q8N697 577 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 B3GALNT2Q8NCR0 500 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 TOR1AIP2Q8NFQ8 470 aa6.57□□□□□ -1.36
NUP88-213ENST00000576862 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
NUP88-213ENST00000576862 TMEM233B4DJY2 109 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 GOLIM4O00461 696 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 MPPED1O15442 326 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 RHOP08100 348 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 CD6P30203 668 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 LOXL3P58215 753 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 ZNF169Q14929 603 aaPredicted RBP6.56□□□□□ -1.36
NUP88-213ENST00000576862 PTPRRQ15256 657 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 LMBRD2Q68DH5 695 aaPredicted RBP6.56□□□□□ -1.36
NUP88-213ENST00000576862 DARS2Q6PI48 645 aaKnown RBP6.56□□□□□ -1.36
NUP88-213ENST00000576862 PGBD1Q96JS3 809 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 PDLIM2Q96JY6 352 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 MESP1Q9BRJ9 268 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 ACTRT3Q9BYD9 372 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 TPSD1Q9BZJ3 242 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 SERHLQ9NQF3 203 aa6.56□□□□□ -1.36
NUP88-213ENST00000576862 ADGRA2Q96PE1 1338 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 ISM1B1AKI9 464 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 ADM5C9JUS6 153 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 MGST3O14880 152 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 TBC1D4O60343 1298 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 LMNAP02545 664 aaKnown RBP6.55□□□□□ -1.36
NUP88-213ENST00000576862 PEX2P28328 305 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 WNT3P56703 355 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 NXPH1P58417 271 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
NUP88-213ENST00000576862 MRPS35P82673 323 aaKnown RBP6.55□□□□□ -1.36
NUP88-213ENST00000576862 PURAQ00577 322 aaKnown RBP6.55□□□□□ -1.36
NUP88-213ENST00000576862 FMO1Q01740 532 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 ITIH3Q06033 890 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 POLD3Q15054 466 aaPredicted RBP6.55□□□□□ -1.36
NUP88-213ENST00000576862 CNGA2Q16280 664 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 TXNRD1Q16881 649 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 MICU3Q86XE3 530 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 ZNF280BQ86YH2 543 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 ACTRT2Q8TDY3 377 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 TFAP2BQ92481 460 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 SLC9A6Q92581 669 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 FAM136AQ96C01 138 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 APIPQ96GX9 242 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 SUCLG2Q96I99 432 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 FBXL20Q96IG2 436 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 SSX2IPQ9Y2D8 614 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 PCDHGB6Q9Y5F9 930 aa6.55□□□□□ -1.36
NUP88-213ENST00000576862 CHRM2P08172 466 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 PDHA1P08559 390 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 BRAFP15056 766 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 PXNP49023 591 aaPredicted RBP6.54□□□□□ -1.36
NUP88-213ENST00000576862 MAPK10P53779 464 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 SP2Q02086 613 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 ZIK1Q3SY52 487 aaPredicted RBP6.54□□□□□ -1.36
NUP88-213ENST00000576862 PRR16Q569H4 304 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 LAYNQ6UX15 382 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 MOGAT1Q96PD6 335 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 NELL2Q99435 816 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 PTDSS2Q9BVG9 487 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 LRRC27Q9C0I9 530 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
NUP88-213ENST00000576862 TRIM43BA6NCK2 446 aa6.53□□□□□ -1.36
NUP88-213ENST00000576862 hCG_1984214I3L0E3 225 aa6.53□□□□□ -1.36
NUP88-213ENST00000576862 MYO1CO00159 1063 aa6.53□□□□□ -1.36
NUP88-213ENST00000576862 PPM1DO15297 605 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms