RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DNAJB7Q7Z6W7 309 aaPredicted RBP25.13■■□□□ 1.61
SNF8-217ENST00000576353 SPATA2LQ8IUW3 424 aaPredicted RBP25.13■■□□□ 1.61
SNF8-217ENST00000576353 HS6ST3Q8IZP7 471 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 ING5Q8WYH8 240 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 FUBP3Q96I24 572 aaKnown RBP eCLIP25.13■■□□□ 1.61
SNF8-217ENST00000576353 GBP4Q96PP9 640 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 LRFN3Q9BTN0 628 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 PI4K2AQ9BTU6 479 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 BICDL2A1A5D9 508 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 MYBPHLA2RUH7 354 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 PPP1R3GB7ZBB8 358 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 FGF19O95750 216 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 CD44P16070 742 aaKnown RBP25.12■■□□□ 1.61
SNF8-217ENST00000576353 PPP3CAQ08209 521 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 HTR4Q13639 388 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 TAF12Q16514 161 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 CFAP221Q4G0U5 840 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 FOXR2Q6PJQ5 311 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 SLC44A3Q8N4M1 653 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 RSAD2Q8WXG1 361 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 TCEAL4Q96EI5 215 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 MCRS1Q96EZ8 462 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 IMPG2Q9BZV3 1241 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 TMEM8AQ9HCN3 771 aa25.12■■□□□ 1.61
SNF8-217ENST00000576353 TRIM49BA6NDI0 452 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 TMEM221A6NGB7 291 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 M0R296 226 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 HCRTO43612 131 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 ATP2C2O75185 946 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 ASS1P00966 412 aaKnown RBP25.11■■□□□ 1.61
SNF8-217ENST00000576353 HLA-DRAP01903 254 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 CEBPBP17676 345 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 ATF6P18850 670 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 CCR2P41597 374 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 RPL10AP62906 217 aaKnown RBP25.11■■□□□ 1.61
SNF8-217ENST00000576353 KRT39Q6A163 491 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 KLHL10Q6JEL2 608 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 CCDC150Q8NCX0 1101 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 LRRC3Q9BY71 257 aa25.11■■□□□ 1.61
SNF8-217ENST00000576353 A8MXQ7 604 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 PSMC1P62191 440 aaKnown RBP25.1■■□□□ 1.61
SNF8-217ENST00000576353 NELFBQ8WX92 580 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 CEP63Q96MT8 703 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 LPIN3Q9BQK8 851 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 GPR88Q9GZN0 384 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 MMRN2Q9H8L6 949 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 CRTAC1Q9NQ79 661 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 MAGEC2Q9UBF1 373 aaPredicted RBP25.1■■□□□ 1.61
SNF8-217ENST00000576353 ARMCX3Q9UH62 379 aaPredicted RBP25.1■■□□□ 1.61
SNF8-217ENST00000576353 NUMBLQ9Y6R0 609 aa25.1■■□□□ 1.61
SNF8-217ENST00000576353 CYP2F1P24903 491 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 PARM1Q6UWI2 310 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 BMP8AQ7Z5Y6 402 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 FILIP1Q7Z7B0 1213 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 TMC8Q8IU68 726 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 MYCBPAPQ8TBZ2 947 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 TAS1R2Q8TE23 839 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 GIPC2Q8TF65 315 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 CLSTN2Q9H4D0 955 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 SMYD3Q9H7B4 428 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 METTL14Q9HCE5 456 aaKnown RBP25.09■■□□□ 1.61
SNF8-217ENST00000576353 DUSP12Q9UNI6 340 aa25.09■■□□□ 1.61
SNF8-217ENST00000576353 MOSPD3O75425 235 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 PTPN1P18031 435 aaKnown RBP25.08■■□□□ 1.61
SNF8-217ENST00000576353 MAGEA11P43364 429 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 CDH8P55286 799 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 TCERG1LQ5VWI1 586 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 TTI2Q6NXR4 508 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 FGF14Q92915 247 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 MYLPFQ96A32 169 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 ASIC4Q96FT7 647 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 SMOC2Q9H3U7 446 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 LMBRD1Q9NUN5 540 aa25.08■■□□□ 1.61
SNF8-217ENST00000576353 DOCK6Q96HP0 2047 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 MXI1P50539 228 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 CYP27A1Q02318 531 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 PAK1Q13153 545 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 DDR2Q16832 855 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 CCDC142Q17RM4 750 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 DCAF17Q5H9S7 520 aaPredicted RBP25.07■■□□□ 1.6
SNF8-217ENST00000576353 MDH1BQ5I0G3 518 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 VSTM1Q6UX27 236 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 SCARA5Q6ZMJ2 495 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 FRMD5Q7Z6J6 570 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 SHKBP1Q8TBC3 707 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 PBXIP1Q96AQ6 731 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 TNIP3Q96KP6 325 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 DUSP9Q99956 384 aaKnown RBP25.07■■□□□ 1.6
SNF8-217ENST00000576353 CTNND2Q9UQB3 1225 aa25.07■■□□□ 1.6
SNF8-217ENST00000576353 A0A1W2PRU2 124 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 GOLGA6L22H0YM25 854 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 ECI2O75521 394 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 CSH1P0DML2 217 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 CSH2P0DML3 217 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 SRFP11831 508 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 GJA1P17302 382 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 GABRR2P28476 465 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 CDC25CP30307 473 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 TEAD2Q15562 447 aa25.06■■□□□ 1.6
SNF8-217ENST00000576353 SPOPLQ6IQ16 392 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms