RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ACOT1Q86TX2 421 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 METTL23Q86XA0 190 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 TOP6BLQ8N6T0 577 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 C12orf29Q8N999 325 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 FBXL13Q8NEE6 735 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 OR6B3Q8NGW1 331 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 LMO3Q8TAP4 145 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ITFG1Q8TB96 612 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 WHAMMQ8TF30 809 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ING5Q8WYH8 240 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 PPP2R3CQ969Q6 453 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 TRIM44Q96DX7 344 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 TCEAL4Q96EI5 215 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 KREMEN1Q96MU8 473 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ASB2Q96Q27 587 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF518BQ9C0D4 1074 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ELOVL4Q9GZR5 314 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 INTS2Q9H0H0 1204 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ADAM7Q9H2U9 754 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 SMOC2Q9H3U7 446 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 VRTNQ9H8Y1 702 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 SFXN1Q9H9B4 322 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF334Q9HCZ1 680 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 FAM49BQ9NUQ9 324 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 RAB20Q9NX57 234 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 GCNT4Q9P109 453 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 CEP72Q9P209 647 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZKSCAN5Q9Y2L8 839 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 INSL5Q9Y5Q6 135 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 NCANO14594 1321 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 CARNS1A5YM72 827 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 A8MXQ7 604 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 H7C4K7 107 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 PRRG1O14668 218 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 ZMYND10O75800 440 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 TPM3P06753 285 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 BMP1P13497 986 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SLC9A1P19634 815 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 CYP2F1P24903 491 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 ATICP31939 592 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 CYP27A1Q02318 531 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 CREMQ03060 361 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 DDR2Q16832 855 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 TCP11X2Q5H9J9 407 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 PPM1LQ5SGD2 360 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 STXBP5Q5T5C0 1151 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 FOXR2Q6PJQ5 311 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 PAQR9Q6ZVX9 377 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 GET4Q7L5D6 327 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 APTXQ7Z2E3 356 aaKnown RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 UBR7Q8N806 425 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SUSD6Q92537 303 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SMG7Q92540 1137 aaKnown RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 PCED1BQ96HM7 432 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 BCO2Q9BYV7 579 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 GTPBP4Q9BZE4 634 aaKnown RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 TRIM5Q9C035 493 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 VPS16Q9H269 839 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SNX25Q9H3E2 840 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 THAP9Q9H5L6 903 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SIX2Q9NPC8 291 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 ACP6Q9NPH0 428 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 RRAGDQ9NQL2 400 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-215ENST00000576033 COG5Q9UP83 839 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 SSX2IPQ9Y2D8 614 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 COQ4Q9Y3A0 265 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
CCDC40-215ENST00000576033 OR6C75A6NL08 312 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 C2CD4DB7Z1M9 353 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 RNF225M0QZC1 329 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 EPHB6O15197 1021 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 TACC1O75410 805 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 BEST1O76090 585 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 ATF2P15336 505 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 CEBPBP17676 345 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 BDNFP23560 247 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 GTF2H1P32780 548 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 GNL1P36915 607 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 AP3M2P53677 418 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 USP46P62068 366 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 FANCCQ00597 558 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 GPR17Q13304 367 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 PLD1Q13393 1074 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 CUL2Q13617 745 aa8.43□□□□□ -1.06
CCDC40-215ENST00000576033 BMS1Q14692 1282 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 CBX2Q14781 532 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 SMAD2Q15796 467 aaKnown RBP8.43□□□□□ -1.06
CCDC40-215ENST00000576033 SGSM1Q2NKQ1 1148 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms