RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 TPP1O14773 563 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 TBX3O15119 743 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 TRIAP1O43715 76 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 C1QL1O75973 258 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 GRPP07492 148 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 ATXN1LP0C7T5 689 aaKnown RBP4.11□□□□□ -1.75
CDC27-218ENST00000575830 CYP2C9P11712 490 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 MYF5P13349 255 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 RHCEP18577 417 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 ITPKBP27987 946 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 PCSK6P29122 969 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 PPIFP30405 207 aaKnown RBP4.11□□□□□ -1.75
CDC27-218ENST00000575830 LOXL3P58215 753 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 RHDQ02161 417 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 CTBP1Q13363 440 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SEMA5AQ13591 1074 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SMN1Q16637 294 aaKnown RBP4.11□□□□□ -1.75
CDC27-218ENST00000575830 AMOTQ4VCS5 1084 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 ARHGAP29Q52LW3 1261 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 CCDC157Q569K6 752 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SFRP4Q6FHJ7 346 aaPredicted RBP4.11□□□□□ -1.75
CDC27-218ENST00000575830 SLC30A10Q6XR72 485 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 DGKHQ86XP1 1220 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SLC44A3Q8N4M1 653 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 CAVIN3Q969G5 261 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 NMD3Q96D46 503 aaKnown RBP4.11□□□□□ -1.75
CDC27-218ENST00000575830 APIPQ96GX9 242 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SUCLG2Q96I99 432 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 MSLNLQ96KJ4 702 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 SLC46A1Q96NT5 459 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 MOGAT1Q96PD6 335 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 BHMT2Q9H2M3 363 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 FAM204AQ9H8W3 233 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 PRDM11Q9NQV5 511 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 KLC4Q9NSK0 619 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 STK32BQ9NY57 414 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 STAP2Q9UGK3 403 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDC27-218ENST00000575830 USP19O94966 1318 aa4.11□□□□□ -1.75
CDC27-218ENST00000575830 CCDC151A5D8V7 595 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 TRIM43BA6NCK2 446 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 ADM5C9JUS6 153 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 F5H697 171 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 BTN3A1O00481 513 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 MGST3O14880 152 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 PEX1O43933 1283 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 MYBP10242 640 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 WT1P19544 449 aaPredicted RBP4.1□□□□□ -1.75
CDC27-218ENST00000575830 CACNB3P54284 484 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 CACNA2D1P54289 1103 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 UCP3P55916 312 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 MRPS35P82673 323 aaKnown RBP4.1□□□□□ -1.75
CDC27-218ENST00000575830 FSTL1Q12841 308 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 IQCB1Q15051 598 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 TXNRD1Q16881 649 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
CDC27-218ENST00000575830 VPS53Q5VIR6 699 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 KRT78Q8N1N4 520 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.1□□□□□ -1.75
CDC27-218ENST00000575830 FAM156AQ8NDB6 213 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 TRIM43Q96BQ3 446 aaPredicted RBP4.1□□□□□ -1.75
CDC27-218ENST00000575830 FAM136AQ96C01 138 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 ALG8Q9BVK2 526 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 ZNF518BQ9C0D4 1074 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 SERHLQ9NQF3 203 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 CHPF2Q9P2E5 772 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 CPA4Q9UI42 421 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 PAXBP1Q9Y5B6 917 aa4.1□□□□□ -1.75
CDC27-218ENST00000575830 GOLIM4O00461 696 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 VPS4BO75351 444 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 CSF1RP07333 972 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 KITP10721 976 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 XRCC6P12956 609 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDC27-218ENST00000575830 ITGALP20701 1170 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 GRIA3P42263 894 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 MAPK10P53779 464 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 FAM193AP78312 1265 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 FMO1Q01740 532 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 NHLH1Q02575 133 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 POLD3Q15054 466 aaPredicted RBP4.09□□□□□ -1.75
CDC27-218ENST00000575830 LLGL1Q15334 1064 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 RNF220Q5VTB9 566 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 ZNF783Q6ZMS7 281 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 TSHZ1Q6ZSZ6 1077 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 DNAJC5GQ8N7S2 189 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 FBXO41Q8TF61 875 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 LRTOMTQ8WZ04 291 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 PBKQ96KB5 322 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 CNNM1Q9NRU3 951 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 SEMA4GQ9NTN9 838 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 SERTAD4Q9NUC0 356 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 TMX2Q9Y320 296 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 ENTPD2Q9Y5L3 495 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 COX11Q9Y6N1 276 aa4.09□□□□□ -1.75
CDC27-218ENST00000575830 ZAR1LA6NP61 321 aa4.08□□□□□ -1.76
CDC27-218ENST00000575830 RPL17P18621 184 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms