RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GPT2Q8TD30 523 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 WHAMMQ8TF30 809 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 SMARCE1Q969G3 411 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 MYLPFQ96A32 169 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 PLA2G2FQ9BZM2 168 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 CLSTN2Q9H4D0 955 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 ABCB6Q9NP58 842 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 RMND1Q9NWS8 449 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 COQ4Q9Y3A0 265 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 NUMBLQ9Y6R0 609 aa9.3□□□□□ -0.92
SMG6-216ENST00000575176 F5P12259 2224 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 M0R296 226 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 PRRG1O14668 218 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 SLC16A3O15427 465 aaKnown RBP9.29□□□□□ -0.92
SMG6-216ENST00000575176 KINO60870 393 aaKnown RBP9.29□□□□□ -0.92
SMG6-216ENST00000575176 HUS1O60921 280 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 NOL4O94818 638 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ALADP13716 330 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 GJA1P17302 382 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 NPR3P17342 541 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ATICP31939 592 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 GCLMP48507 274 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 VAMP7P51809 220 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 CDH8P55286 799 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ADAM9Q13443 819 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 WDR72Q3MJ13 1102 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ISM2Q6H9L7 571 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ELMSAN1Q6PJG2 1045 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 INTS8Q75QN2 995 aaKnown RBP9.29□□□□□ -0.92
SMG6-216ENST00000575176 IRF2BP1Q8IU81 584 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 SPPL2BQ8TCT7 592 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
SMG6-216ENST00000575176 PCED1BQ96HM7 432 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 FUBP3Q96I24 572 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMG6-216ENST00000575176 ASB16Q96NS5 453 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 LRRC3BQ96PB8 259 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 FNBP1Q96RU3 617 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 ARID3AQ99856 593 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 SYT15Q9BQS2 421 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 PI4K2AQ9BTU6 479 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 C1QTNF1Q9BXJ1 281 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 TRPV4Q9HBA0 871 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMG6-216ENST00000575176 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
SMG6-216ENST00000575176 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 BIN1O00499 593 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 LRG1P02750 347 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 F11P03951 625 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 FAM163BP0C2L3 166 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 GBP2P32456 591 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 PSMC2P35998 433 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 MAGEA11P43364 429 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 LHX1P48742 406 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 AP3M2P53677 418 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 VCPP55072 806 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 USP46P62068 366 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 NOP14P78316 857 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 MYO1EQ12965 1108 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 TDGQ13569 410 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 TEAD2Q15562 447 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 FAM78AQ5JUQ0 283 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 TMEM31Q5JXX7 168 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 SDHAF4Q5VUM1 108 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 DNAJB7Q7Z6W7 309 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 SLC44A3Q8N4M1 653 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 ZMIZ2Q8NF64 920 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 LMO3Q8TAP4 145 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 GPR152Q8TDT2 470 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 SYAP1Q96A49 352 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 CHFRQ96EP1 664 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 TRMT2BQ96GJ1 504 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 IPO9Q96P70 1041 aaKnown RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 PIDD1Q9HB75 910 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 TMEM8AQ9HCN3 771 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 SLC2A4RGQ9NR83 387 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 IGSF9Q9P2J2 1179 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 CDH9Q9ULB4 789 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 CTNND2Q9UQB3 1225 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 ZFP37Q9Y6Q3 630 aaPredicted RBP9.28□□□□□ -0.92
SMG6-216ENST00000575176 DMXL1Q9Y485 3027 aa9.28□□□□□ -0.92
SMG6-216ENST00000575176 CFAP54Q96N23 3096 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms