RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 RTKNQ9BST9 563 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 PI4K2AQ9BTU6 479 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 PCDHB5Q9Y5E4 795 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 DCDC2BA2VCK2 349 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 LRP3O75074 770 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 ITGB3P05106 788 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 HOXA6P31267 233 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 CNR2P34972 360 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 TFAMQ00059 246 aaKnown RBP23.67■■□□□ 1.38
SNF8-216ENST00000573795 TAF12Q16514 161 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 CCDC142Q17RM4 750 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 SDHAF4Q5VUM1 108 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 TRIM68Q6AZZ1 485 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 SYNPOQ8N3V7 929 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 MAB21L3Q8N8X9 362 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 LEO1Q8WVC0 666 aaPredicted RBP23.67■■□□□ 1.38
SNF8-216ENST00000573795 ACCSQ96QU6 501 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 CCDC39Q9UFE4 941 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 ZMYM5Q9UJ78 669 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 AGAP1Q9UPQ3 857 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 EML5Q05BV3 1969 aa23.67■■□□□ 1.38
SNF8-216ENST00000573795 EPG5Q9HCE0 2579 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 ATG2BQ96BY7 2078 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 A0A087X0B3 334 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 FRMD3A2A2Y4 597 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 EXTL3O43909 919 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 GAP43P17677 238 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 PNPLA4P41247 253 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 RRAGBQ5VZM2 374 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 TXNDC8Q6A555 127 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 FSTL4Q6MZW2 842 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 WDR5BQ86VZ2 330 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 OSTM1Q86WC4 334 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 CBWD1Q9BRT8 395 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
SNF8-216ENST00000573795 OLFML3Q9NRN5 406 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 SEMA4GQ9NTN9 838 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 THG1LQ9NWX6 298 aaKnown RBP23.66■■□□□ 1.38
SNF8-216ENST00000573795 ANAPC1Q9H1A4 1944 aa23.66■■□□□ 1.38
SNF8-216ENST00000573795 TPRP12270 2363 aaKnown RBP23.66■■□□□ 1.38
SNF8-216ENST00000573795 GREB1Q4ZG55 1949 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 HCRTO43612 131 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 PRPF40AO75400 957 aaKnown RBP23.65■■□□□ 1.38
SNF8-216ENST00000573795 GCNT3O95395 438 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 ACAT1P24752 427 aaKnown RBP23.65■■□□□ 1.38
SNF8-216ENST00000573795 DDX6P26196 483 aaKnown RBP eCLIP23.65■■□□□ 1.383e-6■□□□□ 10
SNF8-216ENST00000573795 TSPY1Q01534 308 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 RUNX3Q13761 415 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 TMEM196Q5HYL7 178 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 SV2BQ7L1I2 683 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 ACBD6Q9BR61 282 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 EBF3Q9H4W6 596 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 DDX43Q9NXZ2 648 aaKnown RBP23.65■■□□□ 1.38
SNF8-216ENST00000573795 RBAKQ9NYW8 714 aaPredicted RBP23.65■■□□□ 1.38
SNF8-216ENST00000573795 SIX4Q9UIU6 781 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 EXOC7Q9UPT5 735 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 SPAG17Q6Q759 2223 aa23.65■■□□□ 1.38
SNF8-216ENST00000573795 MYO16Q9Y6X6 1858 aa23.64■■□□□ 1.38
SNF8-216ENST00000573795 KIAA1549LQ6ZVL6 1849 aa23.64■■□□□ 1.38
SNF8-216ENST00000573795 GOLGA8IPA6NC78 632 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 GOLGA8JA6NMD2 632 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 NOL4O94818 638 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 ARSAP15289 507 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 GARTP22102 1010 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 CYP2F1P24903 491 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 AVPR1AP37288 418 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 CSRP2Q16527 193 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 NFE2Q16621 373 aaPredicted RBP23.64■■□□□ 1.37
SNF8-216ENST00000573795 DDR2Q16832 855 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 INTS6LQ5JSJ4 861 aaKnown RBP23.64■■□□□ 1.37
SNF8-216ENST00000573795 PRR23CQ6ZRP0 262 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.64■■□□□ 1.37
SNF8-216ENST00000573795 MON1AQ86VX9 555 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 FAM160A2Q8N612 972 aaPredicted RBP23.64■■□□□ 1.37
SNF8-216ENST00000573795 LRRC52Q8N7C0 313 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 TDP1Q9NUW8 608 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 MAGED2Q9UNF1 606 aaPredicted RBP23.64■■□□□ 1.37
SNF8-216ENST00000573795 ACACBO00763 2458 aa23.64■■□□□ 1.37
SNF8-216ENST00000573795 TRDMT1O14717 391 aaKnown RBP23.63■■□□□ 1.37
SNF8-216ENST00000573795 CSH1P0DML2 217 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 CSH2P0DML3 217 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 NAIF1Q69YI7 327 aaPredicted RBP23.63■■□□□ 1.37
SNF8-216ENST00000573795 NETO1Q8TDF5 533 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 KIF9Q9HAQ2 790 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 FBRSL1Q9HCM7 1045 aaKnown RBP23.63■■□□□ 1.37
SNF8-216ENST00000573795 PDE11AQ9HCR9 933 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 ABCB6Q9NP58 842 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 GDAP2Q9NXN4 497 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 ITGA11Q9UKX5 1188 aa23.63■■□□□ 1.37
SNF8-216ENST00000573795 KMT2BQ9UMN6 2715 aaPredicted RBP23.63■■□□□ 1.37
SNF8-216ENST00000573795 PTPRJQ12913 1337 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 SDK1Q7Z5N4 2213 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 SOBPA7XYQ1 873 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 SLC30A4O14863 429 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 GDF9O60383 454 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 LDHAP00338 332 aaKnown RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 CEBPZQ03701 1054 aaKnown RBP23.62■■□□□ 1.37
SNF8-216ENST00000573795 BFSP1Q12934 665 aa23.62■■□□□ 1.37
SNF8-216ENST00000573795 ZNF268Q14587 947 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms