RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 GPR161Q8N6U8 529 aaKnown RBP12.6□□□□□ -0.39
PRPF8-206ENST00000572723 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
PRPF8-206ENST00000572723 IQUBQ8NA54 791 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 BPIFB1Q8TDL5 484 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 LEO1Q8WVC0 666 aaPredicted RBP12.6□□□□□ -0.39
PRPF8-206ENST00000572723 SNX21Q969T3 373 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 ANKRD36BP1Q96IX9 119 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 FGFBP2Q9BYJ0 223 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 TRIM9Q9C026 710 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 KIAA1586Q9HCI6 787 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 ABCB6Q9NP58 842 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 TMLHEQ9NVH6 421 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
PRPF8-206ENST00000572723 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
PRPF8-206ENST00000572723 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 GABRDO14764 452 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
PRPF8-206ENST00000572723 KRT19P08727 400 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 HMGA1P17096 107 aaKnown RBP12.59□□□□□ -0.39
PRPF8-206ENST00000572723 CDR1P51861 262 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
PRPF8-206ENST00000572723 CYP4F8P98187 520 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 BFSP1Q12934 665 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 LRRC32Q14392 662 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 DGKKQ5KSL6 1271 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 TSSK4Q6SA08 328 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SPEM1Q8N4L4 309 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 NOC3LQ8WTT2 800 aaKnown RBP12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
PRPF8-206ENST00000572723 C7orf25Q9BPX7 421 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SIX4Q9UIU6 781 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SNX9Q9Y5X1 595 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 COL4A2P08572 1712 aa12.59□□□□□ -0.39
PRPF8-206ENST00000572723 SLC38A8A6NNN8 435 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 EIF3DO15371 548 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF8-206ENST00000572723 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 TNNC2P02585 160 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 TDGF1P13385 188 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 CYP2F1P24903 491 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 PCSK1P29120 753 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 CTHP32929 405 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 AVPR1AP37288 418 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 NLRP12P59046 1061 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 SNRPFP62306 86 aaKnown RBP12.58□□□□□ -0.4
PRPF8-206ENST00000572723 SOWAHAQ2M3V2 549 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 INTS6LQ5JSJ4 861 aaKnown RBP12.58□□□□□ -0.4
PRPF8-206ENST00000572723 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 LIMS2Q7Z4I7 341 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 MON1AQ86VX9 555 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 MRPS31Q92665 395 aaKnown RBP12.58□□□□□ -0.4
PRPF8-206ENST00000572723 DHX58Q96C10 678 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 MYRFLQ96LU7 910 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 PKMYT1Q99640 499 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 MTMR12Q9C0I1 747 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 GKN1Q9NS71 199 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 TDP1Q9NUW8 608 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 GTSE1Q9NYZ3 720 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
PRPF8-206ENST00000572723 GTF3C4Q9UKN8 822 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.4
PRPF8-206ENST00000572723 PAPSS2O95340 614 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-206ENST00000572723 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 HOXD13P35453 343 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 SOX9P48436 509 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 ASIC1P78348 528 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 GAS6Q14393 721 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 DDR2Q16832 855 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 ITPRIPL2Q3MIP1 535 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 FAM171BQ6P995 826 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 TXNDC11Q6PKC3 985 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 SHC4Q6S5L8 630 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
PRPF8-206ENST00000572723 CBWD2Q8IUF1 395 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 MAB21L3Q8N8X9 362 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
PRPF8-206ENST00000572723 FUBP3Q96I24 572 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF8-206ENST00000572723 HPDLQ96IR7 371 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 FAM83CQ9BQN1 747 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 MAGEF1Q9HAY2 307 aa12.57□□□□□ -0.4
PRPF8-206ENST00000572723 HSPBP1Q9NZL4 362 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms