RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ZNF560Q96MR9 790 aa10.64□□□□□ -0.71
TRAPPC1-205ENST00000572656 PCDHGA5Q9Y5G8 931 aa10.64□□□□□ -0.71
TRAPPC1-205ENST00000572656 ACACBO00763 2458 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 RNF40O75150 1001 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 BMP15O95972 392 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 EGFP01133 1207 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 CSH1P0DML2 217 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 CSH2P0DML3 217 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 ARSAP15289 507 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 KCNA4P22459 653 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 GJB2P29033 226 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 ADSSP30520 456 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 DDIT3P35638 169 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 PNPLA4P41247 253 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 GALK1P51570 392 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 TSPY1Q01534 308 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 POSTNQ15063 836 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 RABEP1Q15276 862 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 CCDC6Q16204 474 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 FBXO43Q4G163 708 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 PLA2G2CQ5R387 149 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 ZNF720Q7Z2F6 126 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 NT5DC4Q86YG4 428 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 EFCAB13Q8IY85 973 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 LEO1Q8WVC0 666 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 POMGNT1Q8WZA1 660 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 LARP4BQ92615 738 aaKnown RBP10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 EXOC4Q96A65 974 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 TMX3Q96JJ7 454 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 PI4K2AQ9BTU6 479 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 FBRSL1Q9HCM7 1045 aaKnown RBP10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 RXFP3Q9NSD7 469 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 TMLHEQ9NVH6 421 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 ANGPTL2Q9UKU9 493 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 MAGED2Q9UNF1 606 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 TRIP11Q15643 1979 aa10.63□□□□□ -0.71
TRAPPC1-205ENST00000572656 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 PMLP29590 882 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 GJA4P35212 333 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 GPR15P49685 360 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 RPL10AP62906 217 aaKnown RBP10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 GRIN1Q05586 938 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 PLK5Q496M5 336 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 N4BP2L1Q5TBK1 243 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 STPG1Q5TH74 334 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 PDCL2Q8N4E4 241 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 CPA6Q8N4T0 437 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 RIN3Q8TB24 985 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 TRMT2BQ96GJ1 504 aaKnown RBP10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 ACBD6Q9BR61 282 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 IKZF4Q9H2S9 585 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 ABCB6Q9NP58 842 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 VPS45Q9NRW7 570 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 UXTQ9UBK9 157 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 ZFHX4Q86UP3 3567 aa10.62□□□□□ -0.71
TRAPPC1-205ENST00000572656 HUS1O60921 280 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 PPP1R37O75864 691 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 NOL4O94818 638 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 CYP2F1P24903 491 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 POLR2BP30876 1174 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 MPLP40238 635 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 SHC2P98077 582 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 TFAMQ00059 246 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 MYL7Q01449 175 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 MTF1Q14872 753 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 DDR2Q16832 855 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 SDHAF4Q5VUM1 108 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 SYT13Q7L8C5 426 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 SFR1Q86XK3 245 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 TMEM86AQ8N2M4 240 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 LRRC52Q8N7C0 313 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 STKLD1Q8NE28 680 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 CACTINQ8WUQ7 758 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 OSCP1Q8WVF1 389 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 CD101Q93033 1021 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 MYRFLQ96LU7 910 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 HHIPQ96QV1 700 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 FAM213AQ9BRX8 229 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 LSM14BQ9BX40 385 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 TMEM206Q9H813 350 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 ECT2Q9H8V3 914 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 POLR3BQ9NW08 1133 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 DUS2Q9NX74 493 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 DDX43Q9NXZ2 648 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 EBF1Q9UH73 591 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 L1RE1Q9UN81 338 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 EXOC7Q9UPT5 735 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 CITO14578 2027 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 SPTBN2O15020 2390 aa10.61□□□□□ -0.71
TRAPPC1-205ENST00000572656 PDCD11Q14690 1871 aaKnown RBP10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 TRAV19A0A0A6YYK7 116 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 TADA3O75528 432 aa10.6□□□□□ -0.71
TRAPPC1-205ENST00000572656 RHOBTB1O94844 696 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms