RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PTK2Q05397 1052 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 GPR17Q13304 367 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 RAB33AQ14088 237 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 TRIM14Q14142 442 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 FIGNQ5HY92 759 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 C4orf50Q6ZRC1 276 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 SHC3Q92529 594 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 MYLPFQ96A32 169 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 NAA15Q9BXJ9 866 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 FAM49BQ9NUQ9 324 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 DPP7Q9UHL4 492 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 LUC7L2Q9Y383 392 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 ATP8B3O60423 1300 aa10.05□□□□□ -0.8
NPLOC4-208ENST00000572351 FNDC1Q4ZHG4 1894 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 A0A1W2PQJ5 194 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 WDR27A2RRH5 827 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 FOXN3O00409 490 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CYP26A1O43174 497 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 MED7O43513 233 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 TGM5O43548 720 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 TBC1D4O60343 1298 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 GFPT2O94808 682 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 PAEPP09466 180 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 VDRP11473 427 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CCDC130P13994 396 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 FOSL2P15408 326 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 ADORA2BP29275 332 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 GNA15P30679 374 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SOX5P35711 763 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 FXR1P51114 621 aaKnown RBP eCLIP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 PDE6CP51160 858 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 BPIFB4P59827 614 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 ADCY1Q08828 1119 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 ASIC2Q16515 512 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 DUSP6Q16828 381 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 MGAT5BQ3V5L5 792 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SGO2Q562F6 1265 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 TCEAL5Q5H9L2 206 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 TPGS2Q68CL5 300 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 DPY19L2P1Q6NXN4 242 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CRYBG2Q8N1P7 616 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 UBR7Q8N806 425 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 C12orf29Q8N999 325 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SLC2A14Q8TDB8 520 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 C2orf15Q8WU43 125 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 MYLIPQ8WY64 445 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CYFIP2Q96F07 1278 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 PCED1BQ96HM7 432 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CDCA3Q99618 268 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CDX2Q99626 313 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 SEPT5Q99719 369 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 EDEM3Q9BZQ6 932 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 NUCKS1Q9H1E3 243 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 PDCL3Q9H2J4 239 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CYP4F11Q9HBI6 524 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 CRTAC1Q9NQ79 661 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 AFF4Q9UHB7 1163 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 KIAA1257Q9ULG3 409 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 MTCH2Q9Y6C9 303 aa10.04□□□□□ -0.8
NPLOC4-208ENST00000572351 MTMR11A4FU01 709 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 LRRC53A6NM62 1247 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 THAP12O43422 761 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SPATA31D3P0C874 917 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 FERP16591 822 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 BRD2P25440 801 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 CASP14P31944 242 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 ZNF132P52740 706 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 JAM2P57087 298 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SLC8A3P57103 927 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 ZBED6P86452 979 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 CCDC142Q17RM4 750 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SFMBT2Q5VUG0 894 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 FAM171BQ6P995 826 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 EP400NLQ6ZTU2 488 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 SPATA31D4Q6ZUB0 917 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 LRRTM3Q86VH5 581 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 FAM71AQ8IYT1 594 aa10.03□□□□□ -0.8
NPLOC4-208ENST00000572351 ATAD1Q8NBU5 361 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms