RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 UBE4BO95155 1302 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
LITAF-211ENST00000572255 PRAMEF12O95522 483 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 TNNC2P02585 160 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 CASP1P29466 404 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 WEE1P30291 646 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 MLLT6P55198 1093 aaPredicted RBP18.61■□□□□ 0.57
LITAF-211ENST00000572255 EHHADHQ08426 723 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 PKP1Q13835 747 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 DUOXA2Q1HG44 320 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 INTS6LQ5JSJ4 861 aaKnown RBP18.61■□□□□ 0.57
LITAF-211ENST00000572255 RESP18Q5W5W9 173 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 ATL3Q6DD88 541 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 UNC13DQ70J99 1090 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 TOP6BLQ8N6T0 577 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 SPRYD3Q8NCJ5 442 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 SPATA18Q8TC71 538 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 BLZF1Q9H2G9 400 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 AGPAT3Q9NRZ7 376 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 OBP2AQ9NY56 170 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 FAM13BQ9NYF5 915 aa18.61■□□□□ 0.57
LITAF-211ENST00000572255 OTOGLQ3ZCN5 2332 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 SLC38A8A6NNN8 435 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 TGFB1I1O43294 461 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 HMGA1P17096 107 aaKnown RBP18.6■□□□□ 0.57
LITAF-211ENST00000572255 CCNE1P24864 410 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 GPR15P49685 360 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 MTAPQ13126 283 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 CCDC142Q17RM4 750 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 SOWAHAQ2M3V2 549 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 TMEM150AQ86TG1 271 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 WDR49Q8IV35 697 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 NELFCDQ8IXH7 590 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 STKLD1Q8NE28 680 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 SCFD1Q8WVM8 642 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 MSANTD3Q96H12 275 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 HPDLQ96IR7 371 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 ZFYVE19Q96K21 471 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 PKMYT1Q99640 499 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 SLC46A2Q9BY10 475 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 CHRDQ9H2X0 955 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 ABCB6Q9NP58 842 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 CFAP45Q9UL16 551 aa18.6■□□□□ 0.57
LITAF-211ENST00000572255 ZNF638Q14966 1978 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 KIF26AQ9ULI4 1882 aaPredicted RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 GABRDO14764 452 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 CLIC2O15247 247 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 HCRTO43612 131 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 KINO60870 393 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 CSH1P0DML2 217 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 CSH2P0DML3 217 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 CYP2F1P24903 491 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 PCSK1P29120 753 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 LHX1P48742 406 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 CYP2J2P51589 502 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 NLRP12P59046 1061 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 RPL10AP62906 217 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 DNM1Q05193 864 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 SNRNP35Q16560 246 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 SDHAF4Q5VUM1 108 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 LIMS2Q7Z4I7 341 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 CMTM8Q8IZV2 173 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 RDH13Q8NBN7 331 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 BPIFB1Q8TDL5 484 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 SMG9Q9H0W8 520 aaKnown RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 C8orf33Q9H7E9 229 aaPredicted RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 LMAN1LQ9HAT1 526 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 PRMT8Q9NR22 394 aaPredicted RBP18.59■□□□□ 0.57
LITAF-211ENST00000572255 ZMYM5Q9UJ78 669 aa18.59■□□□□ 0.57
LITAF-211ENST00000572255 F11P03951 625 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 AFMP43652 599 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 SOX9P48436 509 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 SNRPFP62306 86 aaKnown RBP18.58■□□□□ 0.56
LITAF-211ENST00000572255 CUL4BQ13620 913 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 DDR2Q16832 855 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 C1orf228Q6PIY5 440 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 TSSK4Q6SA08 328 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 DPH6Q7L8W6 267 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 XXYLT1Q8NBI6 393 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 IER2Q9BTL4 223 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 SLC39A2Q9NP94 309 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 MAGED2Q9UNF1 606 aaPredicted RBP18.58■□□□□ 0.56
LITAF-211ENST00000572255 PCDHGA2Q9Y5H1 932 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 DMXL1Q9Y485 3027 aa18.58■□□□□ 0.56
LITAF-211ENST00000572255 PVALEFA0A1B0GWK0 134 aa18.57■□□□□ 0.56
LITAF-211ENST00000572255 MYBPHLA2RUH7 354 aa18.57■□□□□ 0.56
LITAF-211ENST00000572255 SPECC1L-ADORA2AF8WAN1 911 aa18.57■□□□□ 0.56
LITAF-211ENST00000572255 DLATP10515 647 aaKnown RBP18.57■□□□□ 0.56
LITAF-211ENST00000572255 CHRNB1P11230 501 aa18.57■□□□□ 0.56
LITAF-211ENST00000572255 DDX6P26196 483 aaKnown RBP eCLIP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms