RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
CCDC40-207ENST00000572253 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 MTERF2Q49AM1 385 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 C3orf62Q6ZUJ4 267 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 RHPN2Q8IUC4 686 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 IQCGQ9H095 443 aaKnown RBP11.31□□□□□ -0.6
CCDC40-207ENST00000572253 MANSC1Q9H8J5 431 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 SCN9AQ15858 1988 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 KIF3CO14782 793 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 PRKCEQ02156 737 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 CLNKQ7Z7G1 428 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 PPFIBP2Q8ND30 876 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 CFAP61Q8NHU2 1237 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 ACSS3Q9H6R3 686 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-207ENST00000572253 GRID1Q9ULK0 1009 aa11.31□□□□□ -0.6
CCDC40-207ENST00000572253 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
CCDC40-207ENST00000572253 LRRIQ4A6NIV6 560 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 K7ERI5 159 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 GYG2O15488 501 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 VNN1O95497 513 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 KRT7P08729 469 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 T-ENOLP0DO92 83 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 GLRA2P23416 452 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 DYNLT1P63172 113 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 KLC1Q07866 573 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 TFDP1Q14186 410 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 NSL1Q96IY1 281 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CDHR1Q96JP9 859 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CYTH2Q99418 400 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 APOBEC3GQ9HC16 384 aaKnown RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 F8VP50 259 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 NVLO15381 856 aaKnown RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 POLR2BP30876 1174 aaKnown RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 PTDSS1P48651 473 aaKnown RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 AP3M2P53677 418 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 MXRA7P84157 204 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ZC3H12AQ5D1E8 599 aaKnown RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 YIPF3Q9GZM5 350 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ZNF862O60290 1169 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 LPXNO60711 386 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 NR3C2P08235 984 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ACADSP16219 412 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 TSHRP16473 764 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 SSTR1P30872 391 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 VHLP40337 213 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CDKN2BP42772 138 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 EMC2Q15006 297 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 BTBD10Q9BSF8 475 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 TLE6Q9H808 572 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 JPH1Q9HDC5 661 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-207ENST00000572253 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 HEY2Q9UBP5 337 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 CNTN6Q9UQ52 1028 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
CCDC40-207ENST00000572253 ENTPD5O75356 428 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 INHBAP08476 426 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SKIP12755 728 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 PSMA2P25787 234 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SESN3P58005 492 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SATB1Q01826 763 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 MAPK6Q16659 721 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 NAIF1Q69YI7 327 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SLC9A2Q9UBY0 812 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 PDHA1P08559 390 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 ESRRAP11474 423 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 TCF4P15884 667 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 GPX6P59796 221 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 OVGP1Q12889 678 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-207ENST00000572253 TAS1R3Q7RTX0 852 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 FBXO36Q8NEA4 188 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 SLC35B2Q8TB61 432 aa11.29□□□□□ -0.6
CCDC40-207ENST00000572253 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms