RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CPB1P15086 417 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 HMGA1P17096 107 aaKnown RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 ACAT1P24752 427 aaKnown RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 LMO2P25791 158 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 GPR15P49685 360 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 CACNA2D1P54289 1103 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 UBE2HP62256 183 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 RBP5P82980 135 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 TWF1Q12792 350 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 BFSP1Q12934 665 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 DUSP4Q13115 394 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SURF1Q15526 300 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 DUOXA2Q1HG44 320 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SLC39A12Q504Y0 691 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 ANKRD40Q6AI12 368 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 FOXR2Q6PJQ5 311 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 HFE2Q6ZVN8 426 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 GAREM2Q75VX8 874 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SV2AQ7L0J3 742 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 ADGRF2Q8IZF7 708 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 TMEM86AQ8N2M4 240 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SHKBP1Q8TBC3 707 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 EDAQ92838 391 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 FGF13Q92913 245 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 EEF2KMTQ96G04 330 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 HPDLQ96IR7 371 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 ANKRD36BP1Q96IX9 119 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 RPP25Q9BUL9 199 aaKnown RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 OXCT2Q9BYC2 517 aaPredicted RBP9.32□□□□□ -0.92
SMG6-210ENST00000572205 DPEP3Q9H4B8 488 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SMYD3Q9H7B4 428 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 KCNK12Q9HB15 430 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 CYP4F11Q9HBI6 524 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 LMBRD1Q9NUN5 540 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 DPP7Q9UHL4 492 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 DSEQ9UL01 958 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 NR2E1Q9Y466 385 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 SNX9Q9Y5X1 595 aa9.32□□□□□ -0.92
SMG6-210ENST00000572205 MYBPHLA2RUH7 354 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PRPF40AO75400 957 aaKnown RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 TACC1O75410 805 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 HAPLN1P10915 354 aaPredicted RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 FSHRP23945 695 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 ARPP19P56211 112 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 CFAP221Q4G0U5 840 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PABPC1LQ4VXU2 614 aaKnown RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 STXBP5Q5T5C0 1151 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 CWF19L1Q69YN2 538 aaKnown RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PARM1Q6UWI2 310 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 DPH6Q7L8W6 267 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 OTOP3Q7RTS5 596 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 ST13P5Q8NFI4 369 aaPredicted RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 RIN3Q8TB24 985 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 TAS1R2Q8TE23 839 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 CACTINQ8WUQ7 758 aaKnown RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 ING5Q8WYH8 240 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PSMG2Q969U7 264 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 SLC35C1Q96A29 364 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 ZSWIM3Q96MP5 696 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 TWNKQ96RR1 684 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 ACBD6Q9BR61 282 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
SMG6-210ENST00000572205 RAPGEFL1Q9UHV5 662 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 CDH7Q9ULB5 785 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 DUSP12Q9UNI6 340 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 SORCS3Q9UPU3 1222 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 SLC27A5Q9Y2P5 690 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 ZNF292O60281 2723 aa9.31□□□□□ -0.92
SMG6-210ENST00000572205 PRR33A8MZF0 331 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 ARNTLO00327 626 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 IKBKBO14920 756 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CALUO43852 315 aaPredicted RBP9.3□□□□□ -0.92
SMG6-210ENST00000572205 XYLBO75191 536 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 MICAL2O94851 1124 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 HLA-DRAP01903 254 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 TNNC2P02585 160 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 KRT19P08727 400 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 TNNI1P19237 187 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CCNE1P24864 410 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 ANP32AP39687 249 aaKnown RBP9.3□□□□□ -0.92
SMG6-210ENST00000572205 RAP1GAPP47736 663 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 PSMC1P62191 440 aaKnown RBP9.3□□□□□ -0.92
SMG6-210ENST00000572205 SIGLEC14Q08ET2 396 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 INCA1Q0VD86 236 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 NCOA4Q13772 614 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CBWD6Q4V339 395 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CBWD3Q5JTY5 395 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 CBWD5Q5RIA9 395 aa9.3□□□□□ -0.92
SMG6-210ENST00000572205 RBM43Q6ZSC3 357 aaKnown RBP9.3□□□□□ -0.92
SMG6-210ENST00000572205 TRIM67Q6ZTA4 783 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms