RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 TWNKQ96RR1 684 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 SYT15Q9BQS2 421 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 SAMSN1Q9NSI8 373 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 PCDHB5Q9Y5E4 795 aa9.29□□□□□ -0.92
TRAPPC1-203ENST00000571739 MYO10Q9HD67 2058 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 XYLBO75191 536 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 RHOP08100 348 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CCDC192P0DO97 292 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 NDST1P52848 882 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 TSPY1Q01534 308 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 NFE2Q16621 373 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 DDR2Q16832 855 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 KLHL40Q2TBA0 621 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 MGAT5BQ3V5L5 792 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 SDHAF4Q5VUM1 108 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ACOT1Q86TX2 421 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CREBRFQ8IUR6 639 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ITFG1Q8TB96 612 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ENOX1Q8TC92 643 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 GPR152Q8TDT2 470 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 TCEAL4Q96EI5 215 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 PCED1BQ96HM7 432 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ZNF512Q96ME7 567 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 MYADMQ96S97 322 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CORO1BQ9BR76 489 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CYP3A43Q9HB55 503 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ZNF334Q9HCZ1 680 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 AVENQ9NQS1 362 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CLUHO75153 1309 aa9.28□□□□□ -0.92
TRAPPC1-203ENST00000571739 CLDN5O00501 218 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 P4HA2O15460 535 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 LAMP2P13473 410 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 P4HA1P13674 534 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 HMGA1P17096 107 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 GJA1P17302 382 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 BDNFP23560 247 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FSHRP23945 695 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ALDH1A3P47895 512 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 EPHB3P54753 998 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 EPHA5P54756 1037 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 INCA1Q0VD86 236 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 LRMPQ12912 555 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ORC1Q13415 861 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 MTMR3Q13615 1198 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 NCAPHQ15003 741 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 CFAP221Q4G0U5 840 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 PABPC1LQ4VXU2 614 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 MDH1BQ5I0G3 518 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 PRSS36Q5K4E3 855 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 GAREM2Q75VX8 874 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 UNC93AQ86WB7 457 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 TMC8Q8IU68 726 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ZDHHC14Q8IZN3 488 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 C12orf29Q8N999 325 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 STKLD1Q8NE28 680 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ST13P5Q8NFI4 369 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 GIPC2Q8TF65 315 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FGF13Q92913 245 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 PSMG2Q969U7 264 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 MYLPFQ96A32 169 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FAXDC2Q96IV6 333 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ARID3AQ99856 593 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FUCA2Q9BTY2 467 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 RPP25Q9BUL9 199 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ELOVL4Q9GZR5 314 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ABCB6Q9NP58 842 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 ANO10Q9NW15 660 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 MAGEC2Q9UBF1 373 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-203ENST00000571739 DACH1Q9UI36 760 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms