RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PDGFRBP09619 1106 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 NPR3P17342 541 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 CYP2F1P24903 491 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 GABRR2P28476 465 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 PCSK1P29120 753 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 TNNC1P63316 161 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 CLDN10P78369 228 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 SMARCB1Q12824 385 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 VEPH1Q14D04 833 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 NFE2Q16621 373 aaPredicted RBP15.58■□□□□ 0.08
LITAF-208ENST00000571627 WDR72Q3MJ13 1102 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 C1orf220Q5T0J3 134 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.08
LITAF-208ENST00000571627 GAREM2Q75VX8 874 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 DPH6Q7L8W6 267 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ITIH5Q86UX2 942 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 TMEM105Q8N8V8 129 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 SPATA18Q8TC71 538 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ASB16Q96NS5 453 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 SYT15Q9BQS2 421 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 XYLT2Q9H1B5 865 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 CRTAC1Q9NQ79 661 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 NXF1Q9UBU9 619 aaKnown RBP15.58■□□□□ 0.08
LITAF-208ENST00000571627 WNT16Q9UBV4 365 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 FRMD4BQ9Y2L6 1034 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ASB3Q9Y575 518 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 NME7Q9Y5B8 376 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 PCDHA5Q9Y5H7 936 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 TICRRQ7Z2Z1 1910 aa15.58■□□□□ 0.08
LITAF-208ENST00000571627 ZNF638Q14966 1978 aaKnown RBP15.58■□□□□ 0.08
LITAF-208ENST00000571627 ECI2O75521 394 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 VNN1O95497 513 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 C4BPAP04003 597 aaKnown RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 TRIM49P0CI25 452 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 TRIM49CP0CI26 452 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 WARSP23381 471 aaKnown RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 NCOA4Q13772 614 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 GRM2Q14416 872 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 NFIL3Q16649 462 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 ZNF699Q32M78 642 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 SCARA5Q6ZMJ2 495 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 SPATA2LQ8IUW3 424 aaPredicted RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 GPIHBP1Q8IV16 184 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 PRSS33Q8NF86 280 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 ZSCAN18Q8TBC5 510 aaPredicted RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 MYLPFQ96A32 169 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 SYAP1Q96A49 352 aaPredicted RBP15.57■□□□□ 0.08
LITAF-208ENST00000571627 EEF2KMTQ96G04 330 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 GBP4Q96PP9 640 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 SNX25Q9H3E2 840 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 ATXN3LQ9H3M9 355 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 SMYD3Q9H7B4 428 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 ARHGEF3Q9NR81 526 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 SLC2A4RGQ9NR83 387 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 NCANO14594 1321 aa15.57■□□□□ 0.08
LITAF-208ENST00000571627 MIA3Q5JRA6 1907 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 STAU1O95793 577 aaKnown RBP15.56■□□□□ 0.08
LITAF-208ENST00000571627 RPL13P26373 211 aaKnown RBP15.56■□□□□ 0.08
LITAF-208ENST00000571627 VIPR2P41587 438 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 PRCPP42785 496 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 RAP1GAPP47736 663 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 VAMP7P51809 220 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 AP3M2P53677 418 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 CYP4F8P98187 520 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 TAF12Q16514 161 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 DDR2Q16832 855 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 OR6B3Q8NGW1 331 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 TMC2Q8TDI7 906 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 ELSPBP1Q96BH3 223 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 MKNK1Q9BUB5 465 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 DPEP3Q9H4B8 488 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 IL21Q9HBE4 155 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 ZFP14Q9HCL3 533 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.56■□□□□ 0.08
LITAF-208ENST00000571627 CDH9Q9ULB4 789 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 COL4A2P08572 1712 aa15.56■□□□□ 0.08
LITAF-208ENST00000571627 STK25O00506 426 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 PI15O43692 258 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 TACC1O75410 805 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 RFX1P22670 979 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 ATICP31939 592 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 GNL1P36915 607 aaPredicted RBP15.55■□□□□ 0.08
LITAF-208ENST00000571627 PLA2G5P39877 138 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 PPP1R2P41236 205 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 CDH8P55286 799 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 ADAM9Q13443 819 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 STIM1Q13586 685 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 ZACNQ401N2 412 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 GPR158Q5T848 1215 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 ISM2Q6H9L7 571 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 FAM171BQ6P995 826 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 VITQ6UXI7 678 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 SV2AQ7L0J3 742 aa15.55■□□□□ 0.08
LITAF-208ENST00000571627 SCN4BQ8IWT1 228 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms