RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MMP17Q9ULZ9 603 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CCL26Q9Y258 94 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 COL4A3BPQ9Y5P4 624 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 MYO16Q9Y6X6 1858 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CCDC168Q8NDH2 2452 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 MYLKQ15746 1914 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 ERICH2A1L162 156 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 FLRT2O43155 660 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 TSPAN1O60635 241 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 ALDH1A2O94788 518 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 PLEKHA8P1O95397 391 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 FOSP01100 380 aaPredicted RBP7.62□□□□□ -1.19
CHD3-213ENST00000571249 SMARCA1P28370 1054 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 HNF1BP35680 557 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 SREBF1P36956 1147 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 AMPD2Q01433 879 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 XKR3Q5GH77 459 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 HES3Q5TGS1 186 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 LMBRD2Q68DH5 695 aaPredicted RBP7.62□□□□□ -1.19
CHD3-213ENST00000571249 SLC8B1Q6J4K2 584 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 NOTUMQ6P988 496 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 HEATR3Q7Z4Q2 680 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 CDR2LQ86X02 465 aaPredicted RBP7.62□□□□□ -1.19
CHD3-213ENST00000571249 TICAM1Q8IUC6 712 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 ALLCQ8N6M5 410 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 CTCFLQ8NI51 663 aaPredicted RBP7.62□□□□□ -1.19
CHD3-213ENST00000571249 STK32AQ8WU08 396 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 PRPF31Q8WWY3 499 aaKnown RBP7.62□□□□□ -1.19
CHD3-213ENST00000571249 CCDC51Q96ER9 411 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 LZTS2Q9BRK4 669 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 TPCN1Q9ULQ1 816 aa7.62□□□□□ -1.19
CHD3-213ENST00000571249 TCRBV21S2A2A0A5A6 115 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 ESYT2A0FGR8 921 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 K7ENP7 123 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 KCNK3O14649 394 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 CHMP2AO43633 222 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 B3GAT3O94766 335 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 STBD1O95210 358 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 NPTXRO95502 500 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 ZNF883P0CG24 379 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 AXLP30530 894 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 BRCC3P46736 316 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 PCBP4P57723 403 aaKnown RBP7.61□□□□□ -1.19
CHD3-213ENST00000571249 NCBP1Q09161 790 aaKnown RBP7.61□□□□□ -1.19
CHD3-213ENST00000571249 LAMTOR4Q0VGL1 99 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 DNAJC3Q13217 504 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 EMC10Q5UCC4 262 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 INO80CQ6PI98 192 aaPredicted RBP7.61□□□□□ -1.19
CHD3-213ENST00000571249 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 TXNDC5Q8NBS9 432 aaKnown RBP7.61□□□□□ -1.19
CHD3-213ENST00000571249 SLC7A3Q8WY07 619 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 TMEM143Q96AN5 459 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 ERLEC1Q96DZ1 483 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 DNAJC25Q9H1X3 360 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 EPN3Q9H201 632 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 RIC8AQ9NPQ8 531 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 CD93Q9NPY3 652 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 PCDHGA4Q9Y5G9 962 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 KIAA1549LQ6ZVL6 1849 aa7.61□□□□□ -1.19
CHD3-213ENST00000571249 APCP25054 2843 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 MED13LQ71F56 2210 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 IGHV1OR15-9A0A0B4J2B8 117 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 A1L4Q6 167 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 PTGESO14684 152 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 DIAPH2O60879 1101 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 ADAM23O75077 832 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 KLF8O95600 359 aaPredicted RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 THP07101 528 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 FAM87AP0C7U9 286 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 VAMP1P23763 118 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 MATKP42679 507 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 CYP4F8P98187 520 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 MESP2Q0VG99 397 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 BYSLQ13895 437 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 SART3Q15020 963 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 NAB2Q15742 525 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 SKIDA1Q1XH10 827 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZC3H18Q86VM9 953 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 DHX40Q8IX18 779 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZCCHC9Q8N567 271 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZNF454Q8N9F8 522 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 IL17RCQ8NAC3 791 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 RNF149Q8NC42 400 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 KCNE4Q8WWG9 221 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 EXTL1Q92935 676 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 EXOC4Q96A65 974 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZNF419Q96HQ0 510 aaPredicted RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZFRQ96KR1 1074 aaKnown RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 JPH2Q9BR39 696 aaPredicted RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 SLC46A2Q9BY10 475 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 ZDHHC5Q9C0B5 715 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 FAM124BQ9H5Z6 455 aaPredicted RBP7.6□□□□□ -1.19
CHD3-213ENST00000571249 ECT2Q9H8V3 914 aa7.6□□□□□ -1.19
CHD3-213ENST00000571249 ANKRD33BA6NCL7 494 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 TRAPPC3O43617 180 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 VNN2O95498 520 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 CYP3A4P08684 503 aa7.59□□□□□ -1.19
CHD3-213ENST00000571249 RNF224P0DH78 156 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms