RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PRKAR1BP31321 381 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 KRT2P35908 639 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ME1P48163 572 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 RPIAP49247 311 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GPC3P51654 580 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 NDUFA8P51970 172 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ARFIP1P53367 373 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 RBP5P82980 135 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ZNF252P-AS1Q0IIN9 211 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GALNT1Q10472 559 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 BFSP1Q12934 665 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SNAPC2Q13487 334 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SNW1Q13573 536 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 DGKZQ13574 1117 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 AUHQ13825 339 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 MXD4Q14582 209 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 ZNF174Q15697 407 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 STK11Q15831 433 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 IL17AQ16552 155 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PFKFB3Q16875 520 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 ALG11Q2TAA5 492 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 INAVAQ3KP66 663 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 KBTBD12Q3ZCT8 623 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SEZ6Q53EL9 994 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 KCNT1Q5JUK3 1230 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 UBXN11Q5T124 520 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 HHATQ5VTY9 493 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 AADACL4Q5VUY2 407 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CIAPIN1Q6FI81 312 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CAPRIN2Q6IMN6 1127 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 MRM1Q6IN84 353 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 PGBD2Q6P3X8 592 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 KLC3Q6P597 504 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SHC4Q6S5L8 630 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SASS6Q6UVJ0 657 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 IL27RAQ6UWB1 636 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 NXPE4Q6UWF7 544 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 DLK2Q6UY11 383 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 LBX2Q6XYB7 198 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 DBX2Q6ZNG2 339 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PIK3AP1Q6ZUJ8 805 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 C11orf57Q6ZUT1 292 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 MIGA2Q7L4E1 593 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 BNIPLQ7Z465 357 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 BRAPQ7Z569 592 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 RSPH3Q86UC2 560 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 LSRQ86X29 649 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 KRT73Q86Y46 540 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PRR18Q8N4B5 295 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PDCL2Q8N4E4 241 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ATP11CQ8NB49 1132 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GOLM1Q8NBJ4 401 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 RBBP8NLQ8NC74 664 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 TTC16Q8NEE8 873 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ENGASEQ8NFI3 743 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 OR2W6PQ8NHA6 318 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 RFWD2Q8NHY2 731 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GDAP1Q8TB36 358 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ASB12Q8WXK4 309 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CDKL2Q92772 493 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ARL8AQ96BM9 186 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 COA7Q96BR5 231 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ZBED3Q96IU2 234 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 EXOC2Q96KP1 924 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 C7orf26Q96N11 449 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SAMD11Q96NU1 681 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 TMEM237Q96Q45 408 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 YME1L1Q96TA2 773 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CDC6Q99741 560 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GAL3ST1Q99999 423 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 TRIM56Q9BRZ2 755 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 GLIS2Q9BZE0 524 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 TMEM39BQ9GZU3 492 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 BRD8Q9H0E9 1235 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GBP3Q9H0R5 595 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 NUP62CLQ9H1M0 184 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 OR10A4Q9H209 315 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 C1orf21Q9H246 121 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 NRDE2Q9H7Z3 1164 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ACAD9Q9H845 621 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CRTAC1Q9NQ79 661 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CCDC177Q9NQR7 707 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 KRT84Q9NSB2 600 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 MTMR4Q9NYA4 1195 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SUCLA2Q9P2R7 463 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 HOOK1Q9UJC3 728 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 AGO2Q9UKV8 859 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 CCPG1Q9ULG6 757 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ZNRF3Q9ULT6 936 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 DTNAQ9Y4J8 743 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PCDHGB6Q9Y5F9 930 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ZSWIM8A7E2V4 1837 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GOLGB1Q14789 3259 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 MYO3BQ8WXR4 1341 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 LCHNA4D1U4 455 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 KRT87PA6NCN2 255 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 GOLGA6L4A6NEF3 574 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 LRRIQ4A6NIV6 560 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FAM227AF5H4B4 570 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms