RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PALB2Q86YC2 1186 aa16.37■□□□□ 0.21
HERPUD1-219ENST00000570273 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
HERPUD1-219ENST00000570273 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
HERPUD1-219ENST00000570273 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
HERPUD1-219ENST00000570273 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
HERPUD1-219ENST00000570273 FAM170AA1A519 330 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LINC01553A4QN01 128 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 H7C4K7 107 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ZNF263O14978 683 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 MICAL2O94851 1124 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 OAZ2O95190 189 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 SOD2P04179 222 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CFHP08603 1231 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LINC00271P0C7V0 271 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 KRT83P78385 493 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CNGA2Q16280 664 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CCDC142Q17RM4 750 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CLEC16AQ2KHT3 1053 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CTXN3Q4LDR2 81 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 RTP2Q5QGT7 225 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 KIAA0319Q5VV43 1072 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 KIAA1841Q6NSI8 718 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 DENND1BQ6P3S1 775 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ALKBH5Q6P6C2 394 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 TAS1R1Q7RTX1 841 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 OR10T2Q8NGX3 314 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LUC7LQ9NQ29 371 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CRTAC1Q9NQ79 661 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 NAGPAQ9UK23 515 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 TSPAN16Q9UKR8 245 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ADGRG1Q9Y653 693 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 KIAA1671Q9BY89 1806 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 TMCO5BA8MYB1 307 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 FGF18O76093 207 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LCA5LO95447 670 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LSM8O95777 96 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 EFEMP2O95967 443 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CCDC175P0C221 793 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 MYOGP15173 224 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ADORA2BP29275 332 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 GLUD2P49448 558 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 PPP1R26Q5T8A7 1209 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 LCLAT1Q6UWP7 414 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CHRDL2Q6WN34 429 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 ANKS3Q6ZW76 656 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 RNF168Q8IYW5 571 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 SLC2A14Q8TDB8 520 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 RIN2Q8WYP3 895 aaPredicted RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 CYFIP2Q96F07 1278 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 TMEM209Q96SK2 561 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 MED10Q9BTT4 135 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 HESX1Q9UBX0 185 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 PPP2R2CQ9Y2T4 447 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 PCDHA11Q9Y5I1 949 aa16.36■□□□□ 0.21
HERPUD1-219ENST00000570273 MYBPHLA2RUH7 354 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 OR6C75A6NL08 312 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 CYP1A1P04798 512 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 URODP06132 367 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 CA3P07451 260 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 MAGEA1P43355 309 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 NOMO3P69849 1222 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 KRT17Q04695 432 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 MRPL58Q14197 206 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 PRSS55Q6UWB4 352 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 DCP1BQ8IZD4 617 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 KLHL23Q8NBE8 558 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 TMEM35BQ8NCS4 154 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 ZCWPW1Q9H0M4 648 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 TAS2R14Q9NYV8 317 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 STK39Q9UEW8 545 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 COLQQ9Y215 455 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
HERPUD1-219ENST00000570273 ATP8B3O60423 1300 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 A0A1W2PPC1 479 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 C2CD2LO14523 706 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 ARHGEF15O94989 841 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 BMPR1AP36894 532 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 MAPRE1Q15691 268 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 PSMD5Q16401 504 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 C10orf76Q5T2E6 689 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 FAM35AQ86V20 835 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
HERPUD1-219ENST00000570273 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms