RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KXD1Q9BQD3 176 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 RPP25Q9BUL9 199 aaKnown RBP15.51■□□□□ 0.07
COMMD4-225ENST00000569245 GRPEL1Q9HAV7 217 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 TRAF3IP3Q9Y228 551 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 FRMD4BQ9Y2L6 1034 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 PCDHB5Q9Y5E4 795 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 MICAL2O94851 1124 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 CCR2P41597 374 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 LHX1P48742 406 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 MRE11P49959 708 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 PMS1P54277 932 aaKnown RBP15.5■□□□□ 0.07
COMMD4-225ENST00000569245 NFE2Q16621 373 aaPredicted RBP15.5■□□□□ 0.07
COMMD4-225ENST00000569245 SOWAHAQ2M3V2 549 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 DNAJB7Q7Z6W7 309 aaPredicted RBP15.5■□□□□ 0.07
COMMD4-225ENST00000569245 ITIH5Q86UX2 942 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 FLCNQ8NFG4 579 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 TSG101Q99816 390 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 ACBD6Q9BR61 282 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 HSD3B7Q9H2F3 369 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 SLITRK6Q9H5Y7 841 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 DMAC2Q9NW81 257 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 HSFX1Q9UBD0 423 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 NFE2L3Q9Y4A8 694 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 ASB3Q9Y575 518 aa15.5■□□□□ 0.07
COMMD4-225ENST00000569245 MYO10Q9HD67 2058 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 TRIM49BA6NDI0 452 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 CST3P01034 146 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-225ENST00000569245 GJA1P17302 382 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 PCSK1P29120 753 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 AP3M2P53677 418 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 VCPP55072 806 aaKnown RBP15.49■□□□□ 0.07
COMMD4-225ENST00000569245 TNNC1P63316 161 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 TPM4P67936 248 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 NFIL3Q16649 462 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 EDRF1Q3B7T1 1238 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 DPH6Q7L8W6 267 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 OSTM1Q86WC4 334 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 GIPC2Q8TF65 315 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 ZNF516Q92618 1163 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 DUSP9Q99956 384 aaKnown RBP15.49■□□□□ 0.07
COMMD4-225ENST00000569245 LPIN3Q9BQK8 851 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 TMLHEQ9NVH6 421 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 WNT16Q9UBV4 365 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 CA14Q9ULX7 337 aa15.49■□□□□ 0.07
COMMD4-225ENST00000569245 ANK1P16157 1881 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 SCN1AP35498 2009 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 A0A1W2PRU2 124 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 ZNF18P17022 549 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 RPL13P26373 211 aaKnown RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 AVPR2P30518 371 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 EPHA5P54756 1037 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 MYL6P60660 151 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 GPC5P78333 572 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 TEAD2Q15562 447 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 WDR72Q3MJ13 1102 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 INTS6LQ5JSJ4 861 aaKnown RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 FAM78AQ5JUQ0 283 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 IER5LQ5T953 404 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 SPATA2LQ8IUW3 424 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 ZC3H3Q8IXZ2 948 aaKnown RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 SPATA18Q8TC71 538 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 GPR152Q8TDT2 470 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 PSMG2Q969U7 264 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 FAM122AQ96E09 287 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 ZSWIM3Q96MP5 696 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 SNX25Q9H3E2 840 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 ATXN3LQ9H3M9 355 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 FANCLQ9NW38 375 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 NXF1Q9UBU9 619 aaKnown RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 GTF3C4Q9UKN8 822 aa15.48■□□□□ 0.07
COMMD4-225ENST00000569245 ARIH1Q9Y4X5 557 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-225ENST00000569245 WDFY4Q6ZS81 3184 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 LRRIQ3A6PVS8 624 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 GABRDO14764 452 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 HCRTO43612 131 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 ECI2O75521 394 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 FGFR1OPO95684 399 aaKnown RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 FGF19O95750 216 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 PDGFRBP09619 1106 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 ATF6P18850 670 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 NR2F2P24468 414 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 LMO2P25791 158 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 GNL1P36915 607 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 FKBP3Q00688 224 aaKnown RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 TPD52L1Q16890 204 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 CDKAL1Q5VV42 579 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 ASTLQ6HA08 431 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-225ENST00000569245 TANGO2Q6ICL3 276 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 SHKBP1Q8TBC3 707 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 PLEKHO2Q8TD55 490 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 ELSPBP1Q96BH3 223 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 GCNAQ96QF7 691 aa15.47■□□□□ 0.07
COMMD4-225ENST00000569245 GPR88Q9GZN0 384 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 296.6 ms