RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 SMG7Q92540 1137 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 NECAB3Q96P71 396 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 NAA15Q9BXJ9 866 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 COL25A1Q9BXS0 654 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 PRKD2Q9BZL6 878 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 PIDD1Q9HB75 910 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 MAFFQ9ULX9 164 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
NSMCE1-214ENST00000569236 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 HNRNPA1P09651 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 HOXA9P31269 272 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 GCLMP48507 274 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 TNNC1P63316 161 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 MYL7Q01449 175 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 ADCY1Q08828 1119 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 RNF19BQ6ZMZ0 732 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 ADGRF2Q8IZF7 708 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 CEP63Q96MT8 703 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 PGLYRP2Q96PD5 576 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 RTP3Q9BQQ7 232 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 PHF7Q9BWX1 381 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 RHOBTB2Q9BYZ6 727 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 MMRN2Q9H8L6 949 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 NCOR1O75376 2440 aa13.41□□□□□ -0.26
NSMCE1-214ENST00000569236 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 PAPLNO95428 1278 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 FGFR1OPO95684 399 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TUBB4AP04350 444 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 UQCRHP07919 91 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TPM1P09493 284 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 LHX1P48742 406 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 UBXN1Q04323 297 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ZP2Q05996 745 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 PPP3CAQ08209 521 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 SLC39A12Q504Y0 691 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TMEM209Q96SK2 561 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TUBGCP2Q9BSJ2 902 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ZCWPW1Q9H0M4 648 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 XYLT2Q9H1B5 865 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 CCL16O15467 120 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 XYLBO75191 536 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 VNN1O95497 513 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 LRG1P02750 347 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 CASP14P31944 242 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 GTF2H1P32780 548 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 PIK3CAP42336 1068 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 TSPY1Q01534 308 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 CCDC40Q4G0X9 1142 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 KRT39Q6A163 491 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 DCP1BQ8IZD4 617 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 IMPG2Q9BZV3 1241 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
NSMCE1-214ENST00000569236 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 GABRDO14764 452 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 ZSCAN12O43309 604 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 SEC24AO95486 1093 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 HLA-DRAP01903 254 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 PCSK1P29120 753 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 MXI1P50539 228 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 SMARCB1Q12824 385 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 CREBRFQ8IUR6 639 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 GJD3Q8N144 294 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 KBTBD7Q8WVZ9 684 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 TAF4BQ92750 862 aa13.39□□□□□ -0.27
NSMCE1-214ENST00000569236 DENND4AQ7Z401 1863 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms