RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 CHURC1-FNTBB4DL54 471 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 F11P03951 625 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 KRT19P08727 400 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 FNTBP49356 437 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 CASP5P51878 434 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 WNT7BP56706 349 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 NLRP12P59046 1061 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 TNK2Q07912 1038 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 CCINQ13939 588 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 SIM2Q14190 667 aaPredicted RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 Q6ZS52 159 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 LONP2Q86WA8 852 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 PDCL2Q8N4E4 241 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 LRRC52Q8N7C0 313 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 MAB21L3Q8N8X9 362 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 C1orf127Q8N9H9 656 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 LEO1Q8WVC0 666 aaPredicted RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 MRPS31Q92665 395 aaKnown RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 PANK2Q9BZ23 570 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 SMG9Q9H0W8 520 aaKnown RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 GKN1Q9NS71 199 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 TMLHEQ9NVH6 421 aa14.69□□□□□ -0.06
CNOT1-215ENST00000569020 DDX43Q9NXZ2 648 aaKnown RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 UXTQ9UBK9 157 aaPredicted RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 CDV3Q9UKY7 258 aaKnown RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 MAGED2Q9UNF1 606 aaPredicted RBP14.69□□□□□ -0.06
CNOT1-215ENST00000569020 GREB1Q4ZG55 1949 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 ANAPC1Q9H1A4 1944 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 FRMD3A2A2Y4 597 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 GOLGA8IPA6NC78 632 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 GOLGA8JA6NMD2 632 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 K7ESF4 209 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 EXTL3O43909 919 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 TMEM191BP0C7N4 346 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 HMGA1P17096 107 aaKnown RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 RPL10AP62906 217 aaKnown RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 SPEM2Q0P670 501 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 RUNX3Q13761 415 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 SLC39A14Q15043 492 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 WDR44Q5JSH3 913 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 INTS6LQ5JSJ4 861 aaKnown RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 CC2D1AQ6P1N0 951 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 STXBP4Q6ZWJ1 553 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 TMEM150AQ86TG1 271 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 CCDC65Q8IXS2 484 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 GPD1LQ8N335 351 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 ZSWIM2Q8NEG5 633 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 SPATA18Q8TC71 538 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 USP28Q96RU2 1077 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 CBWD1Q9BRT8 395 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 ZSCAN16Q9H4T2 348 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 PCIF1Q9H4Z3 704 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 TDP1Q9NUW8 608 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 GDAP2Q9NXN4 497 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 L1RE1Q9UN81 338 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 SNX9Q9Y5X1 595 aa14.68□□□□□ -0.06
CNOT1-215ENST00000569020 MORC2Q9Y6X9 1032 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 HELZP42694 1942 aaKnown RBP14.68□□□□□ -0.06
CNOT1-215ENST00000569020 KIAA0391O15091 583 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 LRP3O75074 770 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 PRPF6O94906 941 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 RETP07949 1114 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 TGM1P22735 817 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 ACAT1P24752 427 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 LHX1P48742 406 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 GPR15P49685 360 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 ATXN1P54253 815 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 RBP5P82980 135 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 AMPD2Q01433 879 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 DMWDQ09019 674 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 DDR2Q16832 855 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 TXNDC8Q6A555 127 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 HEATR6Q6AI08 1181 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 TOP6BLQ8N6T0 577 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 PDILTQ8N807 584 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 USP13Q92995 863 aaPredicted RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 INTS4Q96HW7 963 aaKnown RBP14.67□□□□□ -0.06
CNOT1-215ENST00000569020 ANKRD36BP1Q96IX9 119 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 FAM83CQ9BQN1 747 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 RTKNQ9BST9 563 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 LRRC27Q9C0I9 530 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 EBF3Q9H4W6 596 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 PDE11AQ9HCR9 933 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 ABCB6Q9NP58 842 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 PARD6AQ9NPB6 346 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 GTF3C4Q9UKN8 822 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 CCL26Q9Y258 94 aa14.67□□□□□ -0.06
CNOT1-215ENST00000569020 HRO43593 1189 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 CYP2F1P24903 491 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 PCSK1P29120 753 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 GRSF1Q12849 480 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNOT1-215ENST00000569020 MYO1EQ12965 1108 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 SURF1Q15526 300 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 SDHAF4Q5VUM1 108 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 CEP68Q76N32 757 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 DPH6Q7L8W6 267 aa14.66□□□□□ -0.06
CNOT1-215ENST00000569020 MON1AQ86VX9 555 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms