RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 TMEM184AQ6ZMB5 413 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 SPATA31D4Q6ZUB0 917 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 KREMEN2Q8NCW0 462 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 VN1R2Q8NFZ6 395 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 NEK11Q8NG66 645 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 C2orf15Q8WU43 125 aaKnown RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 HDAC7Q8WUI4 952 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 CASP10Q92851 521 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 TMEM176AQ96HP8 235 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 LPIN3Q9BQK8 851 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 NAA15Q9BXJ9 866 aaKnown RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 XPO4Q9C0E2 1151 aaKnown RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 ELOVL4Q9GZR5 314 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 GANQ9H2C0 597 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 DPP7Q9UHL4 492 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 FBXW11Q9UKB1 542 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 AJAP1Q9UKB5 411 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 MAFFQ9ULX9 164 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 FHOD1Q9Y613 1164 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 MYO9BQ13459 2157 aa17.83■□□□□ 0.45
COMMD4-224ENST00000568877 CBFA2T2O43439 604 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 VNN2O95498 520 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 GLP2RO95838 553 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 TPM3P06753 285 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 SRGAP2BP0DMP2 458 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 TRIM21P19474 475 aaKnown RBP17.83■□□□□ 0.44
COMMD4-224ENST00000568877 ELF1P32519 619 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 RAD23BP54727 409 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 PLCB2Q00722 1185 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 COL19A1Q14993 1142 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 CCDC142Q17RM4 750 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 CTC1Q2NKJ3 1217 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 MDH1BQ5I0G3 518 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 SARM1Q6SZW1 724 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 ATAD1Q8NBU5 361 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 PPM1EQ8WY54 764 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 MAN1C1Q9NR34 630 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 CLDND1Q9NY35 253 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 CNTN6Q9UQ52 1028 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 DAAM1Q9Y4D1 1078 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 PCDHB5Q9Y5E4 795 aa17.83■□□□□ 0.44
COMMD4-224ENST00000568877 EPHB6O15197 1021 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SEC24AO95486 1093 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 KRT5P13647 590 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 PBX1P40424 430 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 CDR1P51861 262 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 POLR2FP61218 127 aaKnown RBP17.82■□□□□ 0.44
COMMD4-224ENST00000568877 DUSP4Q13115 394 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 RAPGEF1Q13905 1077 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SMYD5Q6GMV2 418 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 ELMSAN1Q6PJG2 1045 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 C4orf50Q6ZRC1 276 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SPATA2LQ8IUW3 424 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-224ENST00000568877 TCEAL8Q8IYN2 117 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SLC4A11Q8NBS3 891 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SPPL2BQ8TCT7 592 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 SHC3Q92529 594 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 MYLPFQ96A32 169 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
COMMD4-224ENST00000568877 PCED1BQ96HM7 432 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 STK33Q9BYT3 514 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 CYP4F11Q9HBI6 524 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 ABI2Q9NYB9 513 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-224ENST00000568877 HSFX1Q9UBD0 423 aa17.82■□□□□ 0.44
COMMD4-224ENST00000568877 PRRC2BQ5JSZ5 2229 aaKnown RBP17.82■□□□□ 0.44
COMMD4-224ENST00000568877 RNF225M0QZC1 329 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 PRRG1O14668 218 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 PAEPP09466 180 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 ZNF132P52740 706 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 DRAP1Q14919 205 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 SKIV2LQ15477 1246 aaKnown RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 LIN9Q5TKA1 542 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 CCDC149Q6ZUS6 474 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 RTL10Q7L3V2 364 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 C12orf29Q8N999 325 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 RBBP8NLQ8NC74 664 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 MAFAQ8NHW3 353 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 FUBP3Q96I24 572 aaKnown RBP eCLIP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 HEXIM2Q96MH2 286 aaKnown RBP17.81■□□□□ 0.44
COMMD4-224ENST00000568877 B3GNT5Q9BYG0 378 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 CRISPLD1Q9H336 500 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 ABCB6Q9NP58 842 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 DZANK1Q9NVP4 752 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 SLC27A5Q9Y2P5 690 aa17.81■□□□□ 0.44
COMMD4-224ENST00000568877 MYO7AQ13402 2215 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 FOXN3O00409 490 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-224ENST00000568877 AP5Z1O43299 807 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 C8AP07357 584 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 LTBRP36941 435 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 USP8P40818 1118 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 TUFMP49411 452 aaKnown RBP17.8■□□□□ 0.44
COMMD4-224ENST00000568877 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 ANKRD54Q6NXT1 300 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 EP400NLQ6ZTU2 488 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 SLC7A14Q8TBB6 771 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms