RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 FUBP3Q96I24 572 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBR1-207ENST00000568782 CHAMP1Q96JM3 812 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 ASB16Q96NS5 453 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 NELL2Q99435 816 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 TSG101Q99816 390 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 RPP25Q9BUL9 199 aaKnown RBP11.1□□□□□ -0.63
UBR1-207ENST00000568782 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 THG1LQ9NWX6 298 aaKnown RBP11.1□□□□□ -0.63
UBR1-207ENST00000568782 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
UBR1-207ENST00000568782 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
UBR1-207ENST00000568782 MAPK8IP1Q9UQF2 711 aa11.1□□□□□ -0.63
UBR1-207ENST00000568782 NUP210Q8TEM1 1887 aaPredicted RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 MAN2B1O00754 1011 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 IKBKBO14920 756 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 KINO60870 393 aaKnown RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 SOAT2O75908 522 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 GJA1P17302 382 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBR1-207ENST00000568782 PSMC2P35998 433 aaKnown RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 AVPR1AP37288 418 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 GRIK1P39086 918 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 FAM160A1Q05DH4 1040 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 ADAM9Q13443 819 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 SNW1Q13573 536 aaKnown RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 NCOA4Q13772 614 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 SGSM1Q2NKQ1 1148 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 IER5LQ5T953 404 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 ZNF852Q6ZMS4 543 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 INTS8Q75QN2 995 aaKnown RBP11.09□□□□□ -0.63
UBR1-207ENST00000568782 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 MFSD6LQ8IWD5 586 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 DNASE1L2Q92874 299 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 GSDMAQ96QA5 445 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 BCO2Q9BYV7 579 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 CRISPLD1Q9H336 500 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 KCTD10Q9H3F6 313 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
UBR1-207ENST00000568782 ZDBF2Q9HCK1 2354 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 KRBA1A5PL33 1030 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 A8MXQ7 604 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 GABRDO14764 452 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TRIM66O15016 1216 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CETN3O15182 167 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 MAPK13O15264 365 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 STX10O60499 249 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TACC1O75410 805 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 VNN2O95498 520 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 STAU1O95793 577 aaKnown RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 CYP2F1P24903 491 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 GDI1P31150 447 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 ANP32AP39687 249 aaKnown RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 PPP1R2P41236 205 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CCR2P41597 374 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 PDE6CP51160 858 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 VAMP7P51809 220 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CDR1P51861 262 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 STARD6P59095 220 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 NHLH1Q02575 133 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 UBXN2BQ14CS0 331 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CFAP221Q4G0U5 840 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 VSTM1Q6UX27 236 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 ARID3BQ8IVW6 561 aaPredicted RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 TTC9BQ8N6N2 239 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TMEM105Q8N8V8 129 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 SHKBP1Q8TBC3 707 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TAF4BQ92750 862 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CEP295NLQ96MC4 621 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 GOLPH3LQ9H4A5 285 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TASP1Q9H6P5 420 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 TRPV4Q9HBA0 871 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 DMAC2Q9NW81 257 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
UBR1-207ENST00000568782 PTPRJQ12913 1337 aa11.08□□□□□ -0.64
UBR1-207ENST00000568782 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
UBR1-207ENST00000568782 HEPACAM2A8MVW5 462 aa11.07□□□□□ -0.64
UBR1-207ENST00000568782 H0Y858 1186 aa11.07□□□□□ -0.64
UBR1-207ENST00000568782 ATF6P18850 670 aa11.07□□□□□ -0.64
UBR1-207ENST00000568782 VIPR2P41587 438 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms