RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 HMGA1P17096 107 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 KCNA4P22459 653 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 MPLP40238 635 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 RPL10AP62906 217 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 POSTNQ15063 836 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 N4BP2L1Q5TBK1 243 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 SLC39A4Q6P5W5 647 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 SYT13Q7L8C5 426 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 TMEM150AQ86TG1 271 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 CPA6Q8N4T0 437 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 ACDQ96AP0 544 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 HVCN1Q96D96 273 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 P2RY13Q9BPV8 354 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 SMG9Q9H0W8 520 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-215ENST00000568676 RNF40O75150 1001 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 LONP1P36776 959 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 ACOT2P49753 483 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 FAM160A1Q05DH4 1040 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 LRRTM3Q86VH5 581 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 SPATA18Q8TC71 538 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 TMEM206Q9H813 350 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 CCL26Q9Y258 94 aa16.97■□□□□ 0.31
HERPUD1-215ENST00000568676 H3BQV1 296 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 APBB3O95704 486 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 PXNP49023 591 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 NR1H3Q13133 447 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 PLK5Q496M5 336 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 KRI1Q8N9T8 703 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 RAD54LQ92698 747 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 CHFRQ96EP1 664 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 MYRFLQ96LU7 910 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
HERPUD1-215ENST00000568676 MAP1BP46821 2468 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 ZFHX4Q86UP3 3567 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 OTOL1A6NHN0 477 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 ANKRD63C9JTQ0 380 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 KCNK5O95279 499 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 EGFP01133 1207 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 NMT1P30419 496 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 GJA4P35212 333 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 GALK1P51570 392 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 MTF1Q14872 753 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 RNF43Q68DV7 783 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 TXNDC8Q6A555 127 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 TRIM68Q6AZZ1 485 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 FSIP1Q8NA03 581 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 OSCP1Q8WVF1 389 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 POMGNT1Q8WZA1 660 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 CD101Q93033 1021 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 KIF2CQ99661 725 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 ECT2Q9H8V3 914 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 SEL1LQ9UBV2 794 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 MAGED2Q9UNF1 606 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 EXOC7Q9UPT5 735 aa16.95■□□□□ 0.3
HERPUD1-215ENST00000568676 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 HUS1O60921 280 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 NOL4O94818 638 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 LDHAP00338 332 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 TCF3P15923 654 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 PLCG1P19174 1290 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 DDIT3P35638 169 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 PDE6CP51160 858 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 MYL7Q01449 175 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 MCM6Q14566 821 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 CCDC6Q16204 474 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 CFAP221Q4G0U5 840 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 LRRC52Q8N7C0 313 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 CACTINQ8WUQ7 758 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 FUBP3Q96I24 572 aaKnown RBP eCLIP16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 PI4K2AQ9BTU6 479 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 DUSP15Q9H1R2 295 aaPredicted RBP16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 RXFP3Q9NSD7 469 aa16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 DUS2Q9NX74 493 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-215ENST00000568676 SCN1AP35498 2009 aa16.93■□□□□ 0.3
HERPUD1-215ENST00000568676 TRAV19A0A0A6YYK7 116 aa16.93■□□□□ 0.3
HERPUD1-215ENST00000568676 ARSAP15289 507 aa16.93■□□□□ 0.3
HERPUD1-215ENST00000568676 PFKLP17858 780 aa16.93■□□□□ 0.3
HERPUD1-215ENST00000568676 HOXC13P31276 330 aa16.93■□□□□ 0.3
HERPUD1-215ENST00000568676 IFNAR2P48551 515 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms