RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 TFAP2BQ92481 460 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ASCC2Q9H1I8 757 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 MRPL42Q9Y6G3 142 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 NRAPQ86VF7 1730 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 LPXNO60711 386 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 DGAT1O75907 488 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 KRT36O76013 467 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ENO1P06733 434 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 SLC1A1P43005 524 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 CCNHP51946 323 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 SP2Q02086 613 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 GCNT1Q02742 428 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 CENPCQ03188 943 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ZACNQ401N2 412 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ZCCHC9Q8N567 271 aaKnown RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 C12orf50Q8NA57 414 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ATXN7L3BQ96GX2 97 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 MFSD14AQ96MC6 490 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 RILPQ96NA2 401 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 ACAP3Q96P50 834 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 CISHQ9NSE2 258 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 USH1CQ9Y6N9 552 aa9.42□□□□□ -0.9
HDGFL3-206ENST00000568294 MEI4A8MW99 385 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 OAS1P00973 400 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 TROVE2P10155 538 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PYGBP11216 843 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CCND1P24385 295 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 GCAP28676 217 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 BPIFB4P59827 614 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF252P-AS1Q0IIN9 211 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PPP2R5DQ14738 602 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF699Q32M78 642 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CASC4Q6P4E1 433 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ALYREFQ86V81 257 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 GBP7Q8N8V2 638 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PPP1R14CQ8TAE6 165 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 L3MBTL3Q96JM7 780 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CLPTM1LQ96KA5 538 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CEP41Q9BYV8 373 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 NGRNQ9NPE2 291 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF302Q9NR11 478 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ACSS2Q9NR19 701 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 DONSONQ9NYP3 566 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PSMC3IPQ9P2W1 217 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 IP6K2Q9UHH9 426 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 G3BP2Q9UN86 482 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 NUMBLQ9Y6R0 609 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 GYG2O15488 501 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 MTA2O94776 668 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 TMEM63AO94886 807 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ASMTLO95671 621 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 INHBAP08476 426 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 KRT3P12035 628 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 IL1R2P27930 398 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 GMPRP36959 345 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 EIF3EP60228 445 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CXCL9Q07325 125 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 KLF1Q13351 362 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 RCN1Q15293 331 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 C15orf59Q2T9L4 293 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 DSTYKQ6XUX3 929 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 MCPH1Q8NEM0 835 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 RBM41Q96IZ5 413 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PPP1R36Q96LQ0 422 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 DENND2DQ9H6A0 471 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 A1CFQ9NQ94 594 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 IL1RAPL1Q9NZN1 696 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SLC17A6Q9P2U8 582 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 VWA5AO00534 786 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 CYB561D2O14569 222 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 B4GALT5O43286 388 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 C4BPAP04003 597 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 RBP3P10745 1247 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 KLRC2P26717 231 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 SFNP31947 248 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 ELK3P41970 407 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 GPX6P59796 221 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 FAAP100Q0VG06 881 aa9.41□□□□□ -0.9
HDGFL3-206ENST00000568294 NR1H3Q13133 447 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms