RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 RHOP08100 348 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 PTPN1P18031 435 aaKnown RBP13.9□□□□□ -0.18
CNOT1-213ENST00000568158 FSHRP23945 695 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 CYP2F1P24903 491 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-213ENST00000568158 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 TUFMP49411 452 aaKnown RBP13.9□□□□□ -0.18
CNOT1-213ENST00000568158 GPR15P49685 360 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 MXI1P50539 228 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 SMARCB1Q12824 385 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 FBXL13Q8NEE6 735 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 ST13P5Q8NFI4 369 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-213ENST00000568158 SPPL2BQ8TCT7 592 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 GPR152Q8TDT2 470 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 SEPT5Q99719 369 aaPredicted RBP13.9□□□□□ -0.18
CNOT1-213ENST00000568158 DNAJC25Q9H1X3 360 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
CNOT1-213ENST00000568158 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 GNA14O95837 355 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 POU2F2P09086 479 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 FMO5P49326 533 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 EPHB3P54753 998 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 NOP14P78316 857 aaKnown RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 KCNH2Q12809 1159 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 DDR2Q16832 855 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 TPD52L1Q16890 204 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 SLC5A9Q2M3M2 681 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 MDH1BQ5I0G3 518 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 CCDC183Q5T5S1 534 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 SDHAF4Q5VUM1 108 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 GET4Q7L5D6 327 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 OTOP3Q7RTS5 596 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 DNAJB7Q7Z6W7 309 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 SPATA2LQ8IUW3 424 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 TRIM59Q8IWR1 403 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 ELMOD1Q8N336 334 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 TCEAL4Q96EI5 215 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 MAGEC2Q9UBF1 373 aaPredicted RBP13.89□□□□□ -0.19
CNOT1-213ENST00000568158 USTQ9Y2C2 406 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 COQ4Q9Y3A0 265 aa13.89□□□□□ -0.19
CNOT1-213ENST00000568158 CCDC192P0DO97 292 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MYL4P12829 197 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 P4HA1P13674 534 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 GJA1P17302 382 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ATF6P18850 670 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 BDNFP23560 247 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 CCR2P41597 374 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ASPAP45381 313 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 NDST1P52848 882 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MARSP56192 900 aaKnown RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 LRMPQ12912 555 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ORC1Q13415 861 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 WDR44Q5JSH3 913 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ACOT1Q86TX2 421 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 TDRD5Q8NAT2 981 aaKnown RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 CCDC150Q8NCX0 1101 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 STKLD1Q8NE28 680 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 FAM200AQ8TCP9 573 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ING5Q8WYH8 240 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MYLPFQ96A32 169 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 LRRC3Q9BY71 257 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 BCO2Q9BYV7 579 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 DACH1Q9UI36 760 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 MRPS23Q9Y3D9 190 aaKnown RBP13.88□□□□□ -0.19
CNOT1-213ENST00000568158 DENND4AQ7Z401 1863 aa13.88□□□□□ -0.19
CNOT1-213ENST00000568158 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CLDN5O00501 218 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 MOSPD3O75425 235 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 ASGR2P07307 311 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 LAMP2P13473 410 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CD58P19256 250 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 PLD1Q13393 1074 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 PRSS36Q5K4E3 855 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CYP4A22Q5TCH4 519 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CAVIN1Q6NZI2 390 aaKnown RBP13.87□□□□□ -0.19
CNOT1-213ENST00000568158 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 FGF13Q92913 245 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 PCED1BQ96HM7 432 aa13.87□□□□□ -0.19
CNOT1-213ENST00000568158 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms