RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 GCNAQ96QF7 691 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 NELL2Q99435 816 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 SLC46A2Q9BY10 475 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 OSBPL6Q9BZF3 934 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 TASP1Q9H6P5 420 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 LMAN1LQ9HAT1 526 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 TRPV4Q9HBA0 871 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 RCOR1Q9UKL0 485 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 MRPS17Q9Y2R5 130 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 TSC2P49815 1807 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 NCAM2O15394 837 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 PDGFRBP09619 1106 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 TNNI1P19237 187 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 LMO2P25791 158 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 PSMC1P62191 440 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 TNK2Q07912 1038 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 MTAPQ13126 283 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 SNRNP35Q16560 246 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 C2orf15Q8WU43 125 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 ACBD6Q9BR61 282 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 RBM12Q9NTZ6 932 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
GTF3C1-208ENST00000567843 TCHHQ07283 1943 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 A0A1B0GVL5 298 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 ARNTLO00327 626 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 FGF19O95750 216 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 LMNAP02545 664 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 CDC25CP30307 473 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 CASP4P49662 377 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 EHHADHQ08426 723 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 SURF1Q15526 300 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 NFE2Q16621 373 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TRAPPC11Q7Z392 1133 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TMEM150AQ86TG1 271 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 TOP6BLQ8N6T0 577 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 KBTBD7Q8WVZ9 684 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 PKMYT1Q99640 499 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 CCL26Q9Y258 94 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 OTOGLQ3ZCN5 2332 aa13.11□□□□□ -0.31
GTF3C1-208ENST00000567843 MIA3Q5JRA6 1907 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 CHADO15335 359 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 CLSTN1O94985 981 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 F11P03951 625 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 LHX1P48742 406 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 NLRP12P59046 1061 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 CYP24A1Q07973 514 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 CNNM4Q6P4Q7 775 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 WDR49Q8IV35 697 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 XXYLT1Q8NBI6 393 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 E2F7Q96AV8 911 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 MAGEF1Q9HAY2 307 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
GTF3C1-208ENST00000567843 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 GABRDO14764 452 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 KLRC4O43908 158 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 EXOC3O60645 756 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PFKFB1P16118 471 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PCSK1P29120 753 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 HOXC13P31276 330 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 AVPR1AP37288 418 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 RPL10AP62906 217 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 CYP27A1Q02318 531 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 STK4Q13043 487 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms