RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CTAGE1Q96RT6 745 aa5.89□□□□□ -1.47
CAPN3-217ENST00000567817 RBM15Q96T37 977 aaKnown RBP eCLIP5.89□□□□□ -1.47
CAPN3-217ENST00000567817 BTBD2Q9BX70 525 aa5.89□□□□□ -1.47
CAPN3-217ENST00000567817 FTOQ9C0B1 505 aaKnown RBP eCLIP5.89□□□□□ -1.47
CAPN3-217ENST00000567817 ZNF287Q9HBT7 754 aa5.89□□□□□ -1.47
CAPN3-217ENST00000567817 CABP5Q9NP86 173 aa5.89□□□□□ -1.47
CAPN3-217ENST00000567817 ATP8A2Q9NTI2 1148 aa5.89□□□□□ -1.47
CAPN3-217ENST00000567817 MAGEC2Q9UBF1 373 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-217ENST00000567817 ARPP21Q9UBL0 812 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-217ENST00000567817 SRPRBQ9Y5M8 271 aaKnown RBP5.89□□□□□ -1.47
CAPN3-217ENST00000567817 TCHHQ07283 1943 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TRIM75PA6NK02 468 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 ARHGAP6O43182 974 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RANBP6O60518 1105 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SGPL1O95470 568 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SERPINC1P01008 464 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 MYL1P05976 194 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TPM1P09493 284 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TOP1P11387 765 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 CCL5P13501 91 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 CALML3P27482 149 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 BUD31P41223 144 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 EPHB4P54760 987 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 UBASH3AP57075 661 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RPS8P62241 208 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 FAM193AP78312 1265 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 IL13RA1P78552 427 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 LRMPQ12912 555 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TOP3AQ13472 1001 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TNFAIP1Q13829 316 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 POSTNQ15063 836 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 STILQ15468 1287 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SPATS1Q496A3 300 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SBK1Q52WX2 424 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 IFIT1BQ5T764 474 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 ARHGEF18Q6ZSZ5 1173 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 C16orf86Q6ZW13 317 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 UBE2R2Q712K3 238 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 VSTM4Q8IW00 320 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SMAP1Q8IYB5 467 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 LCORLQ8N3X6 602 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RAET1EQ8TD07 263 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 U2AF1L4Q8WU68 220 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 PHKBQ93100 1093 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 C16orf45Q96MC5 204 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RIOK1Q9BRS2 568 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 CRNKL1Q9BZJ0 848 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 XPO4Q9C0E2 1151 aaKnown RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 DEFB129Q9H1M3 183 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 ARMT1Q9H993 441 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TOMM22Q9NS69 142 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RMND1Q9NWS8 449 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 AATFQ9NY61 560 aaKnown RBP eCLIP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 RAI14Q9P0K7 980 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SRRDQ9UH36 339 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 FBXO2Q9UK22 296 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-217ENST00000567817 TNKSO95271 1327 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 XDHP47989 1333 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 PHLPP2Q6ZVD8 1323 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 ADGRA2Q96PE1 1338 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 VCANP13611 3396 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 PIEZO1Q92508 2521 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 LAMA4Q16363 1823 aa5.88□□□□□ -1.47
CAPN3-217ENST00000567817 SPTBN5Q9NRC6 3674 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 STX10O60499 249 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 SLU7O95391 586 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 MARCKSP29966 332 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 PPP1R2P41236 205 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 ETV4P43268 484 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 FNTBP49356 437 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 PPP2CBP62714 309 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 PPP2CAP67775 309 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 GSTO1P78417 241 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 SPAG1Q07617 926 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 TUBB2AQ13885 445 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 USP10Q14694 798 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 TMEM132BQ14DG7 1078 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 WDR72Q3MJ13 1102 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 CFAP100Q494V2 611 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 FILIP1LQ4L180 1135 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 RRP12Q5JTH9 1297 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 DACT2Q5SW24 774 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 CATSPEREQ5SY80 951 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 PIK3R6Q5UE93 754 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 ARL6IP4Q66PJ3 421 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 Q7L0L9 218 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 NECAB2Q7Z6G3 386 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 CREBRFQ8IUR6 639 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 TTC9BQ8N6N2 239 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 ANKRD20A12PQ8NF67 263 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 SPATA20Q8TB22 786 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 ANKS1AQ92625 1134 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 CELF1Q92879 486 aaKnown RBP5.87□□□□□ -1.47
CAPN3-217ENST00000567817 CCDC51Q96ER9 411 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 GSDMAQ96QA5 445 aa5.87□□□□□ -1.47
CAPN3-217ENST00000567817 PTPN18Q99952 460 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms