RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 TRIM68Q6AZZ1 485 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 RIN3Q8TB24 985 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 GCNAQ96QF7 691 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 C8orf33Q9H7E9 229 aaPredicted RBP16.44■□□□□ 0.22
CDR2-206ENST00000567406 OLFML3Q9NRN5 406 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 GKN1Q9NS71 199 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 GTF3C4Q9UKN8 822 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 SNX9Q9Y5X1 595 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 CACNA1AO00555 2505 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
CDR2-206ENST00000567406 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 STX6O43752 255 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 EXTL3O43909 919 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 HUS1O60921 280 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 GARTP22102 1010 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 NLRP12P59046 1061 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 TSPY1Q01534 308 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 STK38Q15208 465 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 FOXD4L6Q3SYB3 417 aaPredicted RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 FOXD4L3Q6VB84 417 aaPredicted RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 PRR23BQ6ZRT6 265 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 CMTM8Q8IZV2 173 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 C2orf15Q8WU43 125 aaKnown RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 PARD6AQ9NPB6 346 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
CDR2-206ENST00000567406 ZNF638Q14966 1978 aaKnown RBP16.43■□□□□ 0.22
CDR2-206ENST00000567406 SDK1Q7Z5N4 2213 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 HRO43593 1189 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 ATP2C2O75185 946 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 LDHAP00338 332 aaKnown RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 HOXD13P35453 343 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 PNPLA4P41247 253 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 NAIF1Q69YI7 327 aaPredicted RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 PKN3Q6P5Z2 889 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 RALGPS2Q86X27 583 aaPredicted RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 SPEM1Q8N4L4 309 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 CELF5Q8N6W0 485 aaKnown RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 USP13Q92995 863 aaPredicted RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 PKMYT1Q99640 499 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 FAM126AQ9BYI3 521 aaPredicted RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 EBF3Q9H4W6 596 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 POLR3BQ9NW08 1133 aaPredicted RBP16.42■□□□□ 0.22
CDR2-206ENST00000567406 OBP2AQ9NY56 170 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 USP18Q9UMW8 372 aa16.42■□□□□ 0.22
CDR2-206ENST00000567406 DENND4CQ5VZ89 1909 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 SPTBN2O15020 2390 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 K7ESF4 209 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ARSAP15289 507 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 TGM1P22735 817 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 CASP1P29466 404 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 AVPR1AP37288 418 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 NRLP54845 237 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 MLLT6P55198 1093 aaPredicted RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 RBP5P82980 135 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 SMARCB1Q12824 385 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 LRRC32Q14392 662 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDR2-206ENST00000567406 SOWAHAQ2M3V2 549 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ITPRIPL2Q3MIP1 535 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 MAMSTRQ6ZN01 415 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ADGRF2Q8IZF7 708 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 GPD1LQ8N335 351 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 RDH13Q8NBN7 331 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 DHX58Q96C10 678 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 CYP2S1Q96SQ9 504 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ZSCAN16Q9H4T2 348 aaPredicted RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 HPS4Q9NQG7 708 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 THG1LQ9NWX6 298 aaKnown RBP16.41■□□□□ 0.22
CDR2-206ENST00000567406 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
CDR2-206ENST00000567406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.4■□□□□ 0.22
CDR2-206ENST00000567406 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
CDR2-206ENST00000567406 SPTLC2O15270 562 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 TADA3O75528 432 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 LMO2P25791 158 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 WEE1P30291 646 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 PXNP49023 591 aaPredicted RBP16.4■□□□□ 0.22
CDR2-206ENST00000567406 PSMC1P62191 440 aaKnown RBP16.4■□□□□ 0.22
CDR2-206ENST00000567406 SPEM2Q0P670 501 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 PPP2R5DQ14738 602 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 E2F4Q16254 413 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 SCN4BQ8IWT1 228 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 LRRC52Q8N7C0 313 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
CDR2-206ENST00000567406 CHFRQ96EP1 664 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 MSANTD3Q96H12 275 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 SLC22A12Q96S37 553 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 FAM83CQ9BQN1 747 aa16.4■□□□□ 0.22
CDR2-206ENST00000567406 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms