RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MYL7Q01449 175 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 DNAH14Q0VDD8 3507 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 PTPRJQ12913 1337 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 BFSP1Q12934 665 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 MYO1EQ12965 1108 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 PKP1Q13835 747 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 TAF12Q16514 161 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 SOWAHAQ2M3V2 549 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 CFAP221Q4G0U5 840 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 FOXD4L5Q5VV16 416 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 RESP18Q5W5W9 173 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 GVINP1Q7Z2Y8 2422 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 TICRRQ7Z2Z1 1910 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 TMEM150AQ86TG1 271 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 WDR49Q8IV35 697 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 ZBTB44Q8NCP5 570 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 CSGALNACT1Q8TDX6 532 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 NUP210Q8TEM1 1887 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 GIPC2Q8TF65 315 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 SCFD1Q8WVM8 642 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 FOXD4L4Q8WXT5 416 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 GCNAQ96QF7 691 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 SLC46A2Q9BY10 475 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 CHRDQ9H2X0 955 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 C8orf33Q9H7E9 229 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 PRMT8Q9NR22 394 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-216ENST00000567023 AGPAT3Q9NRZ7 376 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 FAM13BQ9NYF5 915 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 PCDHGA2Q9Y5H1 932 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 DPYSL4O14531 572 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 TNNC2P02585 160 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CSH1P0DML2 217 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CSH2P0DML3 217 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CHRNB1P11230 501 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 PCSK1P29120 753 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 ME1P48163 572 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CDR1P51861 262 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 NLRP12P59046 1061 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 MTAPQ13126 283 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 SNRNP35Q16560 246 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 BMT2Q1RMZ1 405 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 FAM171BQ6P995 826 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 C12orf56Q8IXR9 622 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 ADGRF2Q8IZF7 708 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CMTM8Q8IZV2 173 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 BPIFB1Q8TDL5 484 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 NOC3LQ8WTT2 800 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 HPDLQ96IR7 371 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 MYRFLQ96LU7 910 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 FAM126AQ9BYI3 521 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 GTF3C4Q9UKN8 822 aa15.29■□□□□ 0.04
COMMD4-216ENST00000567023 NDRG2Q9UN36 371 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
COMMD4-216ENST00000567023 MYBPHLA2RUH7 354 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 KINO60870 393 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 PRAMEF12O95522 483 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 ACAT1P24752 427 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 CCNE1P24864 410 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 CYP2F1P24903 491 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 RPL10AP62906 217 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 CYP4F8P98187 520 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 CSTF1Q05048 431 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 LMBRD2Q68DH5 695 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 OSTM1Q86WC4 334 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 RALGPS2Q86X27 583 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 CELF5Q8N6W0 485 aaKnown RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 SUMF1Q8NBK3 374 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 TMEM174Q8WUU8 243 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 LMAN1LQ9HAT1 526 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 ZSCAN32Q9NX65 697 aa15.28■□□□□ 0.04
COMMD4-216ENST00000567023 EP300Q09472 2414 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-216ENST00000567023 DENND4CQ5VZ89 1909 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 LILRB5O75023 590 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 NOL4O94818 638 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CST3P01034 146 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-216ENST00000567023 FAM163BP0C2L3 166 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 SLFN14P0C7P3 912 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CASP1P29466 404 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 GPR15P49685 360 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 DNM1Q05193 864 aaKnown RBP15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CYP24A1Q07973 514 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 CUL4BQ13620 913 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 PSMD6Q15008 389 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
COMMD4-216ENST00000567023 XXYLT1Q8NBI6 393 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms