RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 IKZF4Q9H2S9 585 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 DDX43Q9NXZ2 648 aaKnown RBP29.75■■■□□ 2.35
UBFD1-206ENST00000566669 DMXL1Q9Y485 3027 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 NUP210Q8TEM1 1887 aaPredicted RBP29.74■■■□□ 2.35
UBFD1-206ENST00000566669 GPR179Q6PRD1 2367 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 ITPRIPL2Q3MIP1 535 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 TSSK4Q6SA08 328 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 GIPC2Q8TF65 315 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 EXOC4Q96A65 974 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 FUBP3Q96I24 572 aaKnown RBP eCLIP29.74■■■□□ 2.35
UBFD1-206ENST00000566669 PANK2Q9BZ23 570 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 GMEB2Q9UKD1 530 aa29.74■■■□□ 2.35
UBFD1-206ENST00000566669 ZNF233A6NK53 670 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 SPTLC2O15270 562 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 PRPF40AO75400 957 aaKnown RBP29.73■■■□□ 2.35
UBFD1-206ENST00000566669 NLRP12P59046 1061 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 CYP4F8P98187 520 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 CFAP221Q4G0U5 840 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 INTS6LQ5JSJ4 861 aaKnown RBP29.73■■■□□ 2.35
UBFD1-206ENST00000566669 IQUBQ8NA54 791 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 RMDN1Q96DB5 314 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 TRMT2BQ96GJ1 504 aaKnown RBP29.73■■■□□ 2.35
UBFD1-206ENST00000566669 CEP295NLQ96MC4 621 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 CBWD1Q9BRT8 395 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 SLC46A2Q9BY10 475 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 MAGEF1Q9HAY2 307 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 KBTBD4Q9NVX7 518 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 L1RE1Q9UN81 338 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 DCHS1Q96JQ0 3298 aa29.73■■■□□ 2.35
UBFD1-206ENST00000566669 EIF3DO15371 548 aaKnown RBP eCLIP29.72■■■□□ 2.35
UBFD1-206ENST00000566669 PRAMEF12O95522 483 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 YEATS4O95619 227 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 KRT19P08727 400 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 SNRPFP62306 86 aaKnown RBP29.72■■■□□ 2.35
UBFD1-206ENST00000566669 BFSP1Q12934 665 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 CNNM4Q6P4Q7 775 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 PDILTQ8N807 584 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 SNX9Q9Y5X1 595 aa29.72■■■□□ 2.35
UBFD1-206ENST00000566669 TCHHQ07283 1943 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 A0A087X0B3 334 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 PRR5-ARHGAP8B1AHC4 643 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 TULP1O00294 542 aaPredicted RBP29.71■■■□□ 2.35
UBFD1-206ENST00000566669 TNNC2P02585 160 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 F11P03951 625 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 HMGA1P17096 107 aaKnown RBP29.71■■■□□ 2.35
UBFD1-206ENST00000566669 HOXA6P31267 233 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 ARHGAP8P85298 464 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 LMNB2Q03252 620 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 ZNF268Q14587 947 aaPredicted RBP29.71■■■□□ 2.35
UBFD1-206ENST00000566669 MAPRE1Q15691 268 aaKnown RBP29.71■■■□□ 2.35
UBFD1-206ENST00000566669 DUOXA2Q1HG44 320 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 DGLUCYQ7Z3D6 616 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 MON1AQ86VX9 555 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 DCLK2Q8N568 766 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 CXorf38Q8TB03 319 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 MYRFLQ96LU7 910 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 LRRC3BQ96PB8 259 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 BACH2Q9BYV9 841 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 PDE11AQ9HCR9 933 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 TDP1Q9NUW8 608 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 INTS13Q9NVM9 706 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 DLL3Q9NYJ7 618 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 GTSE1Q9NYZ3 720 aa29.71■■■□□ 2.35
UBFD1-206ENST00000566669 GABRDO14764 452 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 PRPF6O94906 941 aaKnown RBP29.7■■■□□ 2.35
UBFD1-206ENST00000566669 LAIR1Q6GTX8 287 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 C4orf50Q6ZRC1 276 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 ADGRF2Q8IZF7 708 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 PI4K2AQ9BTU6 479 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 TRIM9Q9C026 710 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 MTMR12Q9C0I1 747 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 PCIF1Q9H4Z3 704 aa29.7■■■□□ 2.35
UBFD1-206ENST00000566669 GOLGA8IPA6NC78 632 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 GOLGA8JA6NMD2 632 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 CUTAO60888 179 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 LRP3O75074 770 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 WNT7BP56706 349 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 CC2D1AQ6P1N0 951 aaPredicted RBP29.69■■■□□ 2.34
UBFD1-206ENST00000566669 SPATA2LQ8IUW3 424 aaPredicted RBP29.69■■■□□ 2.34
UBFD1-206ENST00000566669 MAB21L3Q8N8X9 362 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 FSIP1Q8NA03 581 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 NOC3LQ8WTT2 800 aaKnown RBP29.69■■■□□ 2.34
UBFD1-206ENST00000566669 ZFYVE19Q96K21 471 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 UBE4BO95155 1302 aa29.69■■■□□ 2.34
UBFD1-206ENST00000566669 NOL4O94818 638 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 MAGEA11P43364 429 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 CCINQ13939 588 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 E2F4Q16254 413 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 TMEM150AQ86TG1 271 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 LONP2Q86WA8 852 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 WDR49Q8IV35 697 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 ZSWIM2Q8NEG5 633 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 FAM83CQ9BQN1 747 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 GKN1Q9NS71 199 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 TMLHEQ9NVH6 421 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 EHD2Q9NZN4 543 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 SIX4Q9UIU6 781 aa29.68■■■□□ 2.34
UBFD1-206ENST00000566669 CEP250Q9BV73 2442 aa29.67■■■□□ 2.34
UBFD1-206ENST00000566669 ATG13O75143 517 aa29.67■■■□□ 2.34
UBFD1-206ENST00000566669 FAM163BP0C2L3 166 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms