RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 A8MXQ7 604 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 GABRDO14764 452 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 CILPO75339 1184 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 CNPP09543 421 aaKnown RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 FAM163BP0C2L3 166 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 NDST1P52848 882 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 ARPP19P56211 112 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 PSMC1P62191 440 aaKnown RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 ROR1Q01973 937 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 NR1I3Q14994 352 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 INTS6LQ5JSJ4 861 aaKnown RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 SLC8B1Q6J4K2 584 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 SARM1Q6SZW1 724 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 RSPO2Q6UXX9 243 aaPredicted RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 ENOSF1Q7L5Y1 443 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 ADGRD2Q7Z7M1 963 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 NEK11Q8NG66 645 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 MYLIPQ8WY64 445 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 KREMEN1Q96MU8 473 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 CDX2Q99626 313 aaPredicted RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 CLSTN3Q9BQT9 956 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 GANQ9H2C0 597 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 FAM124BQ9H5Z6 455 aaPredicted RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 RXFP1Q9HBX9 757 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 UBE2TQ9NPD8 197 aaPredicted RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 PLCB1Q9NQ66 1216 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 FNIP2Q9P278 1114 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
KARS-207ENST00000566560 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 NME7Q9Y5B8 376 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 FHOD1Q9Y613 1164 aa12.24□□□□□ -0.45
KARS-207ENST00000566560 ADAM12O43184 909 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TBC1D4O60343 1298 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 OR4Q2P0C623 313 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 UCHL3P15374 230 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 FOSL2P15408 326 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 LMO2P25791 158 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 KLRC2P26717 231 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 OR1D2P34982 312 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
KARS-207ENST00000566560 NRIP1P48552 1158 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 MFAP3P55082 362 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 ORC1Q13415 861 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 RAPGEF1Q13905 1077 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TCEAL5Q5H9L2 206 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 KLHDC7AQ5VTJ3 777 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 IQCEQ6IPM2 695 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
KARS-207ENST00000566560 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 UBR7Q8N806 425 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TWNKQ96RR1 684 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TMEM209Q96SK2 561 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 ACBD6Q9BR61 282 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TRIM5Q9C035 493 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 DNAI2Q9GZS0 605 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 ZCWPW1Q9H0M4 648 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 DPEP3Q9H4B8 488 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 AJAP1Q9UKB5 411 aaPredicted RBP12.23□□□□□ -0.45
KARS-207ENST00000566560 CDH9Q9ULB4 789 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 DAAM1Q9Y4D1 1078 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 TRANK1O15050 2925 aa12.23□□□□□ -0.45
KARS-207ENST00000566560 BRWD1Q9NSI6 2320 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 MYH10P35580 1976 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 MTCL1Q9Y4B5 1905 aaKnown RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 PER2O15055 1255 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 EPHB6O15197 1021 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 CLASP2O75122 1294 aaKnown RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 GLUD1P00367 558 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 KRT5P13647 590 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 ACO1P21399 889 aaKnown RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 POLR2FP61218 127 aaKnown RBP12.22□□□□□ -0.45
KARS-207ENST00000566560 RAB33AQ14088 237 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 DUSP6Q16828 381 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 CCDC142Q17RM4 750 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 SLC39A12Q504Y0 691 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 ZNF394Q53GI3 561 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 DPY19L2P1Q6NXN4 242 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 TMEM270Q6UE05 265 aa12.22□□□□□ -0.45
KARS-207ENST00000566560 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms