RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LDLRAD1Q5T700 205 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 KIAA0319LQ8IZA0 1049 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 PCSK1NQ9UHG2 260 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 STRIP2Q9ULQ0 834 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 CLEC11AQ9Y240 323 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 hCG_1818297A0A087WSY0 165 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 H3BRB1 525 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 M0QYV0 167 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 IFNB1P01574 187 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 PAEPP09466 180 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 IL1R2P27930 398 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 CCNA1P78396 465 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 CYP4F22Q6NT55 531 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 MTHFD1LQ6UB35 978 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 ARFGAP1Q8N6T3 406 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 UBA3Q8TBC4 463 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 HPDLQ96IR7 371 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 HEXIM2Q96MH2 286 aaKnown RBP19.73■□□□□ 0.75
MSLN-207ENST00000566549 C16orf70Q9BSU1 422 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 TMEM121Q9BTD3 319 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 NFKBIZQ9BYH8 718 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
MSLN-207ENST00000566549 TBK1Q9UHD2 729 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 BTBD19C9JJ37 291 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 LRCH4O75427 683 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 CREB1P16220 341 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 CDKN2BP42772 138 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 IFNAR2P48551 515 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 ARSEP51690 589 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 IFT88Q13099 833 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 TFDP3Q5H9I0 405 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 ERMARDQ5T6L9 678 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 RNF187Q5TA31 235 aaPredicted RBP19.73■□□□□ 0.75
MSLN-207ENST00000566549 ILDR2Q71H61 639 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 LINC01465Q8N7H1 131 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 CXorf38Q8TB03 319 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 MGARPQ8TDB4 240 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 L3MBTL3Q96JM7 780 aaPredicted RBP19.73■□□□□ 0.75
MSLN-207ENST00000566549 TMEM109Q9BVC6 243 aa19.73■□□□□ 0.75
MSLN-207ENST00000566549 DDX20Q9UHI6 824 aaKnown RBP19.73■□□□□ 0.75
MSLN-207ENST00000566549 MAGEB2O15479 319 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 CILPO75339 1184 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 MICAL2O94851 1124 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 KIAA0754O94854 1291 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 CAV1Q03135 178 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 TNFAIP2Q03169 654 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 TAP1Q03518 808 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 GPS1Q13098 491 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 LRRC38Q5VT99 294 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 MAP1SQ66K74 1059 aaPredicted RBP19.72■□□□□ 0.75
MSLN-207ENST00000566549 CPLX4Q7Z7G2 160 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 DPP9Q86TI2 863 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 TMEM176AQ96HP8 235 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 PRMT1Q99873 361 aaKnown RBP19.72■□□□□ 0.75
MSLN-207ENST00000566549 CXCL16Q9H2A7 254 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 RNF19AQ9NV58 838 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 CCL15-CCL14A0A0B4J2E2 113 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 SNAI1O95863 264 aaPredicted RBP19.72■□□□□ 0.75
MSLN-207ENST00000566549 MAGEA9P43362 315 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 CCL15Q16663 113 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 KIZQ2M2Z5 673 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 EXOC3L1Q86VI1 746 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 XYLT1Q86Y38 959 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 TAB3Q8N5C8 712 aaPredicted RBP19.72■□□□□ 0.75
MSLN-207ENST00000566549 RBM15Q96T37 977 aaKnown RBP eCLIP19.72■□□□□ 0.75
MSLN-207ENST00000566549 VTA1Q9NP79 307 aa19.72■□□□□ 0.75
MSLN-207ENST00000566549 INTS9Q9NV88 658 aaKnown RBP19.72■□□□□ 0.75
MSLN-207ENST00000566549 SIGLEC16A6NMB1 481 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 TSPAN1O60635 241 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 CD48P09326 243 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 SLC25A11Q02978 314 aaKnown RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 ADCY1Q08828 1119 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 LRRC14Q15048 493 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 FAM187BQ17R55 369 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 HIBCHQ6NVY1 386 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 MICALL1Q8N3F8 863 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 ATXN2LQ8WWM7 1075 aaKnown RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 ARHGEF2Q92974 986 aaKnown RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 LHX5Q9H2C1 402 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 SRRM3A6NNA2 597 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 SGK1O00141 431 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 TAF5Q15542 800 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 GRIK4Q16099 956 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 CAPN12Q6ZSI9 719 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 CROCCP2Q86T23 111 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 ALLCQ8N6M5 410 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 NIPA2Q8N8Q9 360 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 ROPN1BQ9BZX4 212 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 FAM49AQ9H0Q0 323 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 TSPYL1Q9H0U9 437 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 STMN4Q9H169 189 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 ROPN1Q9HAT0 212 aaPredicted RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 MLXIPLQ9NP71 852 aa19.71■□□□□ 0.75
MSLN-207ENST00000566549 DDX56Q9NY93 547 aaKnown RBP19.71■□□□□ 0.75
MSLN-207ENST00000566549 CETPP11597 493 aa19.7■□□□□ 0.74
MSLN-207ENST00000566549 SMPD1P17405 629 aa19.7■□□□□ 0.74
MSLN-207ENST00000566549 MFSD5Q6N075 450 aa19.7■□□□□ 0.74
MSLN-207ENST00000566549 OTUD6BQ8N6M0 293 aa19.7■□□□□ 0.74
MSLN-207ENST00000566549 KIF12Q96FN5 646 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms