RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CDH9Q9ULB4 789 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 CA14Q9ULX7 337 aa20.68■□□□□ 0.9
CCDC113-204ENST00000566498 MAPK13O15264 365 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 MOSPD3O75425 235 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 AKAP3O75969 853 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 FGF19O95750 216 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 ATF6P18850 670 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 RFX1P22670 979 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 WARSP23381 471 aaKnown RBP20.67■□□□□ 0.9
CCDC113-204ENST00000566498 GABRR2P28476 465 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 AVPR2P30518 371 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 PSMC1P62191 440 aaKnown RBP20.67■□□□□ 0.9
CCDC113-204ENST00000566498 SGSM1Q2NKQ1 1148 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 POTEHQ6S545 545 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 INTS8Q75QN2 995 aaKnown RBP20.67■□□□□ 0.9
CCDC113-204ENST00000566498 LIMS2Q7Z4I7 341 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 SHKBP1Q8TBC3 707 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 EEF2KMTQ96G04 330 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 SYT15Q9BQS2 421 aa20.67■□□□□ 0.9
CCDC113-204ENST00000566498 MRPL45Q9BRJ2 306 aaKnown RBP20.67■□□□□ 0.9
CCDC113-204ENST00000566498 GTPBP4Q9BZE4 634 aaKnown RBP20.67■□□□□ 0.9
CCDC113-204ENST00000566498 NRG2O14511 850 aaPredicted RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 CETN3O15182 167 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 TACC1O75410 805 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ECI2O75521 394 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 STAU1O95793 577 aaKnown RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 FAM163BP0C2L3 166 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 RPL10AP62906 217 aaKnown RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 MAPRE1Q15691 268 aaKnown RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ZNF699Q32M78 642 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ZNF667Q5HYK9 610 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 FAM171BQ6P995 826 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 C4orf50Q6ZRC1 276 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 SV2AQ7L0J3 742 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 TMC8Q8IU68 726 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ZSCAN18Q8TBC5 510 aaPredicted RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 SMARCD2Q92925 531 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ELSPBP1Q96BH3 223 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ELMO3Q96BJ8 720 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 TSG101Q99816 390 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 PLA2G2FQ9BZM2 168 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 XYLT2Q9H1B5 865 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ZNF334Q9HCZ1 680 aaPredicted RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 ABCB6Q9NP58 842 aa20.66■□□□□ 0.9
CCDC113-204ENST00000566498 MAGEC2Q9UBF1 373 aaPredicted RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 MAGED2Q9UNF1 606 aaPredicted RBP20.66■□□□□ 0.9
CCDC113-204ENST00000566498 VCPP55072 806 aaKnown RBP20.65■□□□□ 0.9
CCDC113-204ENST00000566498 CDH8P55286 799 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 CYP27A1Q02318 531 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 DDR2Q16832 855 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 CCDC142Q17RM4 750 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 EDRF1Q3B7T1 1238 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 ARHGAP15Q53QZ3 475 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 SDHAF4Q5VUM1 108 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 GAREM2Q75VX8 874 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 GPIHBP1Q8IV16 184 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 SCN4BQ8IWT1 228 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 ELOA2Q8IYF1 753 aaPredicted RBP20.65■□□□□ 0.9
CCDC113-204ENST00000566498 SPATA20Q8TB22 786 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 ASB16Q96NS5 453 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 GCNAQ96QF7 691 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 PKMYT1Q99640 499 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 MMRN2Q9H8L6 949 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 SLC2A4RGQ9NR83 387 aa20.65■□□□□ 0.9
CCDC113-204ENST00000566498 A8MXQ7 604 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 VNN1O95497 513 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 P4HA1P13674 534 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 GPR15P49685 360 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 STIM1Q13586 685 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 ZACNQ401N2 412 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 ZCWPW2Q504Y3 356 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 GPR158Q5T848 1215 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 IER5LQ5T953 404 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 ASTLQ6HA08 431 aaPredicted RBP20.64■□□□□ 0.89
CCDC113-204ENST00000566498 CRTAC1Q9NQ79 661 aa20.64■□□□□ 0.89
CCDC113-204ENST00000566498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC113-204ENST00000566498 KRBA1A5PL33 1030 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 TRIM49P0CI25 452 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 TRIM49CP0CI26 452 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 CSH1P0DML2 217 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 CSH2P0DML3 217 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 EPB41P11171 864 aaKnown RBP20.63■□□□□ 0.89
CCDC113-204ENST00000566498 PTPN1P18031 435 aaKnown RBP20.63■□□□□ 0.89
CCDC113-204ENST00000566498 BDNFP23560 247 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 GRIK1P39086 918 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 VIPR2P41587 438 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 PIK3CAP42336 1068 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 GCLMP48507 274 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 CLCN5P51795 746 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 PFKPQ01813 784 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 CFAP221Q4G0U5 840 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 MDH1BQ5I0G3 518 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 C1orf220Q5T0J3 134 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 STXBP5Q5T5C0 1151 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 ANKRD40Q6AI12 368 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 MYCBPAPQ8TBZ2 947 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 MYLPFQ96A32 169 aa20.63■□□□□ 0.89
CCDC113-204ENST00000566498 FUBP3Q96I24 572 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC113-204ENST00000566498 TRMT61BQ9BVS5 477 aaKnown RBP20.63■□□□□ 0.89
CCDC113-204ENST00000566498 VRTNQ9H8Y1 702 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms