RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 KRT19P08727 400 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 TMEM191BP0C7N4 346 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 SDHBP21912 280 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBR1-206ENST00000566493 CTHP32929 405 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 AVPR1AP37288 418 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 SOX9P48436 509 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 CASP5P51878 434 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
UBR1-206ENST00000566493 RBP5P82980 135 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 SPEM1Q8N4L4 309 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 PDILTQ8N807 584 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 LRRC3BQ96PB8 259 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 ACBD6Q9BR61 282 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 PCIF1Q9H4Z3 704 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
UBR1-206ENST00000566493 GTSE1Q9NYZ3 720 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
UBR1-206ENST00000566493 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
UBR1-206ENST00000566493 SPTBN4Q9H254 2564 aa12.83□□□□□ -0.35
UBR1-206ENST00000566493 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 KIAA0391O15091 583 aaKnown RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 STX6O43752 255 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 PRAMEF12O95522 483 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 CSH1P0DML2 217 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 CSH2P0DML3 217 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 NLRP12P59046 1061 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 AMPD3Q01432 767 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 SATB1Q01826 763 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 SURF1Q15526 300 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 ITPRIPL2Q3MIP1 535 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 GPD1LQ8N335 351 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 MAB21L3Q8N8X9 362 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 ZSWIM2Q8NEG5 633 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 CBWD1Q9BRT8 395 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 UXTQ9UBK9 157 aaPredicted RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 SNX9Q9Y5X1 595 aa12.83□□□□□ -0.36
UBR1-206ENST00000566493 ZNF638Q14966 1978 aaKnown RBP12.83□□□□□ -0.36
UBR1-206ENST00000566493 FRYLO94915 3013 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 A0A087X0B3 334 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 SOBPA7XYQ1 873 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 TNNC2P02585 160 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 TDGF1P13385 188 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 PCSK1P29120 753 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 LHX1P48742 406 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 WNT7BP56706 349 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 AMPD2Q01433 879 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 TNK2Q07912 1038 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 PON2Q15165 354 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 RSPO4Q2I0M5 234 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 PRR23BQ6ZRT6 265 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 SPATA2LQ8IUW3 424 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 SYNPOQ8N3V7 929 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 TOP6BLQ8N6T0 577 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 SPATA18Q8TC71 538 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 ZNF396Q96N95 335 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 KIF9Q9HAQ2 790 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 ABCB6Q9NP58 842 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 F5P12259 2224 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 EP300Q09472 2414 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 KIF26AQ9ULI4 1882 aaPredicted RBP12.82□□□□□ -0.36
UBR1-206ENST00000566493 DENND4CQ5VZ89 1909 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 ZNF292O60281 2723 aa12.82□□□□□ -0.36
UBR1-206ENST00000566493 ZNF233A6NK53 670 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
UBR1-206ENST00000566493 SPTLC2O15270 562 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 F11P03951 625 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
UBR1-206ENST00000566493 CYP2F1P24903 491 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 CNR2P34972 360 aa12.81□□□□□ -0.36
UBR1-206ENST00000566493 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms