RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 MMS22LQ6ZRQ5 1243 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 C1orf131Q8NDD1 294 aaKnown RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 GSTCDQ8NEC7 633 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PPP1R13LQ8WUF5 828 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 RSPH1Q8WYR4 309 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 MCRS1Q96EZ8 462 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 RUNDC3BQ96NL0 473 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 C11orf70Q9BRQ4 267 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 SLITRK6Q9H5Y7 841 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 AGO3Q9H9G7 860 aaKnown RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PAK6Q9NQU5 681 aaPredicted RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 ANAPC7Q9UJX3 599 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PADI3Q9ULW8 664 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PACSIN2Q9UNF0 486 aaPredicted RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 SIGLEC16A6NMB1 481 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 KBTBD13C9JR72 458 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 GABRDO14764 452 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 PPEF2O14830 753 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 SPOPO43791 374 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 MICAL2O94851 1124 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 EOMESO95936 686 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CALCAP01258 141 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 THP07101 528 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CKBP12277 381 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CAPN2P17655 700 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CXCR5P32302 372 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CDH8P55286 799 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 LILRA4P59901 499 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 FAM189BP81408 668 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 SOX4Q06945 474 aaPredicted RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 GRIK3Q13003 919 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF394Q53GI3 561 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 SEL1L2Q5TEA6 688 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 DCAF12L1Q5VU92 463 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 DENND1BQ6P3S1 775 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ARCQ7LC44 396 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ZDHHC17Q8IUH5 632 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM86AQ8N2M4 240 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 IPO4Q8TEX9 1081 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 MAIP1Q8WWC4 291 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 ALG3Q92685 438 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 C18orf8Q96DM3 657 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 RNPC3Q96LT9 517 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 HEXIM2Q96MH2 286 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 UROC1Q96N76 676 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 FTHL17Q9BXU8 183 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 CXCL16Q9H2A7 254 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 GOLPH3Q9H4A6 298 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 STARD7Q9NQZ5 370 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 RGS18Q9NS28 235 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 HMGXB4Q9UGU5 601 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 SNX9Q9Y5X1 595 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
LSM3P5-201ENST00000566307 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 ARHGEF37A1IGU5 675 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 FSCN2O14926 492 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 HUS1O60921 280 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 CTSHP09668 335 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 CD52P31358 61 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PTPN7P35236 360 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 C2orf54Q08AI8 447 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PDCLQ13371 301 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 BFSP2Q13515 415 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 CYP1B1Q16678 543 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PTPN20Q4JDL3 420 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 GLRA4Q5JXX5 417 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF618Q5T7W0 954 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 CC2D1AQ6P1N0 951 aaPredicted RBP9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 DNAJC24Q6P3W2 148 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 XYLT1Q86Y38 959 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PASD1Q8IV76 773 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 RHOT1Q8IXI2 618 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 KATNAL2Q8IYT4 538 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 C12orf50Q8NA57 414 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms