RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 RIPK2O43353 540 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 PRDM1O75626 825 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 BEST1O76090 585 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 ENDOD1O94919 500 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 CAVIN2O95810 425 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 TPM3P06753 285 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 AGFG1P52594 562 aaKnown RBP11.4□□□□□ -0.58
UBFD1-205ENST00000566136 SATB1Q01826 763 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 TDGQ13569 410 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 TBCCQ15814 346 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 TMEM177Q53S58 311 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 ZBTB44Q8NCP5 570 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 FAM84BQ96KN1 310 aaPredicted RBP11.4□□□□□ -0.58
UBFD1-205ENST00000566136 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.58
UBFD1-205ENST00000566136 COL4A5P29400 1685 aa11.4□□□□□ -0.58
UBFD1-205ENST00000566136 ERICH2A1L162 156 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 IL11P20809 199 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 PTX3P26022 381 aaPredicted RBP11.4□□□□□ -0.59
UBFD1-205ENST00000566136 EVX2Q03828 476 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 LRRC74AQ0VAA2 488 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 PTK2BQ14289 1009 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 PRR16Q569H4 304 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 CAVIN4Q5BKX8 364 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 FBXO47Q5MNV8 452 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 CEP70Q8NHQ1 597 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 BRSK1Q8TDC3 778 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF384Q8TF68 577 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 SHC3Q92529 594 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 CUL5Q93034 780 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 DACH2Q96NX9 599 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 ZCWPW1Q9H0M4 648 aa11.4□□□□□ -0.59
UBFD1-205ENST00000566136 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.59
UBFD1-205ENST00000566136 DCP1AQ9NPI6 582 aaPredicted RBP11.4□□□□□ -0.59
UBFD1-205ENST00000566136 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.59
UBFD1-205ENST00000566136 ARPC4-TTLL3A0A0A6YYG9 625 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 LRRC14BA6NHZ5 514 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 BTBD18B2RXH4 712 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 SMPD2O60906 423 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 ABCD3P28288 659 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 C21orf58P58505 322 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 TLE2Q04725 743 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 PTPAQ15257 358 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 PIWIL3Q7Z3Z3 882 aaKnown RBP11.39□□□□□ -0.59
UBFD1-205ENST00000566136 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
UBFD1-205ENST00000566136 CDH24Q86UP0 819 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 STT3BQ8TCJ2 826 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 RIOK1Q9BRS2 568 aaKnown RBP11.39□□□□□ -0.59
UBFD1-205ENST00000566136 UBAC1Q9BSL1 405 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 FAM129AQ9BZQ8 928 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 CPNE7Q9UBL6 633 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 CEP83Q9Y592 693 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 MYH2Q9UKX2 1941 aa11.39□□□□□ -0.59
UBFD1-205ENST00000566136 NUDT19A8MXV4 375 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 INO80B-WBP1J3KQ70 363 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 TNFRSF10CO14798 259 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 FMO6PO60774 539 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 NDST3O95803 873 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 IFNAR1P17181 557 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 CMA1P23946 247 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 SERPINF1P36955 418 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ADH7P40394 386 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ZRSR1Q15695 479 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 C3orf36Q3SXR2 165 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 RBM20Q5T481 1227 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF765Q7L2R6 523 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 LPCAT2Q7L5N7 544 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 TTC7BQ86TV6 843 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 RUBCNQ92622 972 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 C1GALT1C1Q96EU7 318 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 TREX2Q9BQ50 279 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ZCCHC2Q9C0B9 1178 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 DDX18Q9NVP1 670 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 C6orf203Q9P0P8 240 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 IGSF9Q9P2J2 1179 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 GFRA2O00451 464 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 UBE2CO00762 179 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 MGEA5O60502 916 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 MSCO60682 206 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 KITP10721 976 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 RGS2P41220 211 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ECI1P42126 302 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 MTHFRP42898 656 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 TIGD1Q96MW7 591 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 C2orf40Q9H1Z8 148 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 DECR2Q9NUI1 292 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 ZMAT5Q9UDW3 170 aaKnown RBP11.38□□□□□ -0.59
UBFD1-205ENST00000566136 STK36Q9NRP7 1315 aa11.38□□□□□ -0.59
UBFD1-205ENST00000566136 KDM1AO60341 852 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms