RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 RAD23BP54727 409 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CDH8P55286 799 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 DEFB103AP81534 67 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 HTRA4P83105 476 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 NFE2Q16621 373 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 TIGD5Q53EQ6 642 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 WSCD1Q658N2 575 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 ARHGAP17Q68EM7 881 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 FUT10Q6P4F1 479 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 KCNT2Q6UVM3 1135 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF280BQ86YH2 543 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 GLYCTKQ8IVS8 523 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 HERC6Q8IVU3 1022 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 C17orf53Q8N3J3 647 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CEP112Q8N8E3 955 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 B3GALNT2Q8NCR0 500 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 C2orf15Q8WU43 125 aaKnown RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 FAM84AQ96KN4 292 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 SYT15Q9BQS2 421 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 MRPL45Q9BRJ2 306 aaKnown RBP10.42□□□□□ -0.74
SF3B3-207ENST00000566095 TTPALQ9BTX7 342 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CXCL16Q9H2A7 254 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 SYNCQ9H7C4 482 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 CDC23Q9UJX2 597 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 SCINQ9Y6U3 715 aa10.42□□□□□ -0.74
SF3B3-207ENST00000566095 NCANO14594 1321 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 M0QYV0 167 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 DDX3XO00571 662 aaKnown RBP eCLIP10.41□□□□□ -0.741e-8■■■□□ 15.5
SF3B3-207ENST00000566095 DYNC1I1O14576 645 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 SPTLC1O15269 473 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 OAZ2O95190 189 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 URODP06132 367 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 PLEKP08567 350 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 PTPN1P18031 435 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 ACADSBP45954 432 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 TAP1Q03518 808 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 BST2Q10589 180 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 RAB30Q15771 203 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 CLEC16AQ2KHT3 1053 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 TCTN1Q2MV58 587 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 TAF3Q5VWG9 929 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 ACAD10Q6JQN1 1059 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 FAM117BQ6P1L5 589 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 LCLAT1Q6UWP7 414 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 SLFN11Q7Z7L1 901 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 NOP9Q86U38 636 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 SLC4A11Q8NBS3 891 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 MNS1Q8NEH6 495 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 HASPINQ8TF76 798 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 KBTBD7Q8WVZ9 684 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 RFFLQ8WZ73 363 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 CYFIP2Q96F07 1278 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 IGSF21Q96ID5 467 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 MED10Q9BTT4 135 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 HERC2P3Q9BVR0 1158 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 UBE2OQ9C0C9 1292 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 ELOVL4Q9GZR5 314 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 LACRTQ9GZZ8 138 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 CWH43Q9H720 699 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 RC3H2Q9HBD1 1191 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 MRPL47Q9HD33 250 aaKnown RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 LZTFL1Q9NQ48 299 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 AVENQ9NQS1 362 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 WDR35Q9P2L0 1181 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 UVRAGQ9P2Y5 699 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 DNAJB4Q9UDY4 337 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 MAFFQ9ULX9 164 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.41□□□□□ -0.74
SF3B3-207ENST00000566095 ALPK3Q96L96 1907 aa10.41□□□□□ -0.74
SF3B3-207ENST00000566095 SCN1AP35498 2009 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 EFCAB8A8MWE9 144 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SART1O43290 800 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SLU7O95391 586 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SOD2P04179 222 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 RB1P06400 928 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 MMEP08473 750 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 PDGFRBP09619 1106 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FAM200BP0CF97 657 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 PNMA6AP0CW24 399 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FGFR3P22607 806 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 BRD2P25440 801 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 CDH5P33151 784 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 BRCC3P46736 316 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 NAP1L1P55209 391 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 AMPD2Q01433 879 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FMO1Q01740 532 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 PLCB3Q01970 1234 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 CENPCQ03188 943 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 UBE3AQ05086 875 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 CTXN3Q4LDR2 81 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 INTS6LQ5JSJ4 861 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF569Q5MCW4 686 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FAM171A1Q5VUB5 890 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms