RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NUDT18Q6ZVK8 323 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DTX3LQ8TDB6 740 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 HPS1Q92902 700 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SKA1Q96BD8 255 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RTFDC1Q9BY42 306 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 CLK4Q9HAZ1 481 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 DNAJC17Q9NVM6 304 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 UTP11Q9Y3A2 253 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 FAM32AQ9Y421 112 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 TNRQ92752 1358 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 B2RBV5 119 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 BMP10O95393 424 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZNF12P17014 697 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TMED10P49755 219 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 GRB10Q13322 594 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KRT81Q14533 505 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 USF2Q15853 346 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 MTERF2Q49AM1 385 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZCCHC8Q6NZY4 707 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 LRP10Q7Z4F1 713 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NLRX1Q86UT6 975 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TTC30AQ86WT1 665 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TICAM1Q8IUC6 712 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PCYOX1LQ8NBM8 494 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 HACD3Q9P035 362 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PRELID1Q9Y255 219 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KIF13AQ9H1H9 1805 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 XRN1Q8IZH2 1706 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ITM2AO43736 263 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TARSP26639 723 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 LRRC63Q05C16 580 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZNF211Q13398 564 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZNF276Q8N554 614 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PIP4K2CQ8TBX8 421 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DDI1Q8WTU0 396 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CHPT1Q8WUD6 406 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NSL1Q96IY1 281 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZFRQ96KR1 1074 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 NT5C3AQ9H0P0 336 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TPK1Q9H3S4 243 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZFP69BQ9UJL9 534 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 GPC6Q9Y625 555 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 MRPL42Q9Y6G3 142 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 PCDH11YQ9BZA8 1340 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 MIF4GDA9UHW6 222 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 STARD3NLO95772 234 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 LDHAP00338 332 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 RCVRNP35243 200 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NUMBP49757 651 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 NFE2L1Q14494 772 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SEC23AQ15436 765 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RGS21Q2M5E4 152 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CYP2U1Q7Z449 544 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SLC13A5Q86YT5 568 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 GIPC3Q8TF64 312 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CITED4Q96RK1 184 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 MLXIPLQ9NP71 852 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DISC1Q9NRI5 854 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TAGLN3Q9UI15 199 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TDRKHQ9Y2W6 561 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 V9GY48 417 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 CICQ96RK0 1608 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 FGGP02679 453 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 POLR2EP19388 210 aaKnown RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 PHKA2P46019 1235 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PLA2G4EQ3MJ16 856 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CROCCP3Q8IVE0 287 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DAGLBQ8NCG7 672 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SHKBP1Q8TBC3 707 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 FAM172AQ8WUF8 416 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 SCFD1Q8WVM8 642 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RIT1Q92963 219 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 TRABDQ9H4I3 376 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DMTF1Q9Y222 760 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 MYH11P35749 1972 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 CNTNAP5Q8WYK1 1306 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RSPH10B2B2RC85 870 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 GPAA1O43292 621 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 OXSR1O95747 527 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 RSPH10BP0C881 870 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ARPC4P59998 168 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 RALGDSQ12967 914 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 KCTD21Q4G0X4 260 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 HSF5Q4G112 596 aaPredicted RBP3.05□□□□□ -1.92
CHD9-218ENST00000566029 FYB2Q5VWT5 728 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 METTL21CQ5VZV1 264 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 ZNF449Q6P9G9 518 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 PMEPA1Q969W9 287 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 BRD9Q9H8M2 597 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 DTNAQ9Y4J8 743 aa3.05□□□□□ -1.92
CHD9-218ENST00000566029 COL1A1P02452 1464 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 DNAJA2O60884 412 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 GH1P01241 217 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HOXC9P31274 260 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 KRT20P35900 424 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 RXRGP48443 463 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 HNRNPFP52597 415 aaKnown RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 ASPHQ12797 758 aa3.04□□□□□ -1.92
CHD9-218ENST00000566029 ORC2Q13416 577 aaPredicted RBP3.04□□□□□ -1.92
CHD9-218ENST00000566029 SLC1A5Q15758 541 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms