RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SHC3Q92529 594 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 L2HGDHQ9H9P8 463 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 MTMR10Q9NXD2 777 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 CEP72Q9P209 647 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 AJAP1Q9UKB5 411 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-206ENST00000565990 KIAA1257Q9ULG3 409 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 PCDHGC5Q9Y5F6 944 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 PTPRDP23468 1912 aa13.45□□□□□ -0.26
SF3B3-206ENST00000565990 ITIH6Q6UXX5 1313 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 A8MXQ7 604 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 ZSCAN12O43309 604 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 HCRTO43612 131 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 PTPN1P18031 435 aaKnown RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 ZNF132P52740 706 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 JAM2P57087 298 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 SMARCB1Q12824 385 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 DUSP6Q16828 381 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 INTS6LQ5JSJ4 861 aaKnown RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 PLPP4Q5VZY2 271 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TPGS2Q68CL5 300 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TMEM184AQ6ZMB5 413 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 Q7L0L9 218 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 ADGRD2Q7Z7M1 963 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 PPFIBP1Q86W92 1011 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 VSTM4Q8IW00 320 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 DCP1BQ8IZD4 617 aaKnown RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TMEM176AQ96HP8 235 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 GUCD1Q96NT3 240 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TWNKQ96RR1 684 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TMEM209Q96SK2 561 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 NT5C1AQ9BXI3 368 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 TTYH3Q9C0H2 523 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 CRTAC1Q9NQ79 661 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
SF3B3-206ENST00000565990 PRRC2BQ5JSZ5 2229 aaKnown RBP13.44□□□□□ -0.26
SF3B3-206ENST00000565990 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 MYBPHLA2RUH7 354 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 ATP2C2O75185 946 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 SLU7O95391 586 aaKnown RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 ADH1AP07327 375 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 PAEPP09466 180 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 ATF2P15336 505 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 CD58P19256 250 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 KLRC2P26717 231 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 CLCN4P51793 760 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 POLR2FP61218 127 aaKnown RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 ROR1Q01973 937 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 DRAP1Q14919 205 aaPredicted RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 PTPN21Q16825 1174 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 SCARA5Q6ZMJ2 495 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 FAM71AQ8IYT1 594 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 DEFB123Q8N688 67 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 B3GALNT2Q8NCR0 500 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 MYCBPAPQ8TBZ2 947 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
SF3B3-206ENST00000565990 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 IQCDQ96DY2 449 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 TNIP3Q96KP6 325 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 FAM161BQ96MY7 647 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 TLE6Q9H808 572 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 GTF3C4Q9UKN8 822 aa13.43□□□□□ -0.26
SF3B3-206ENST00000565990 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 ARHGAP6O43182 974 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 TGM5O43548 720 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 PAPLNO95428 1278 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 VNN2O95498 520 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 TPM1P09493 284 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 ADAM15Q13444 863 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
SF3B3-206ENST00000565990 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 CFAP221Q4G0U5 840 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 TMEM270Q6UE05 265 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 PAQR9Q6ZVX9 377 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 RTL10Q7L3V2 364 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
SF3B3-206ENST00000565990 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms