RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GDAP2Q9NXN4 497 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 GTSE1Q9NYZ3 720 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 HSPBP1Q9NZL4 362 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 CCL26Q9Y258 94 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 SNX9Q9Y5X1 595 aa25.53■■□□□ 1.68
RAB40C-209ENST00000565511 NCAM2O15394 837 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 TGFB1I1O43294 461 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 TADA3O75528 432 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 FGF19O95750 216 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 F11P03951 625 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 TMEM191BP0C7N4 346 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 ZSCAN22P10073 491 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-209ENST00000565511 CYP2F1P24903 491 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 CDC25CP30307 473 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 NLRP12P59046 1061 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 TSPY1Q01534 308 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 EHHADHQ08426 723 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 DDR2Q16832 855 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 SOWAHAQ2M3V2 549 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 ARHGAP15Q53QZ3 475 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 CNNM4Q6P4Q7 775 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 BLZF1Q9H2G9 400 aa25.52■■□□□ 1.68
RAB40C-209ENST00000565511 CACNA1AO00555 2505 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 KINO60870 393 aaKnown RBP25.51■■□□□ 1.67
RAB40C-209ENST00000565511 HUS1O60921 280 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 LILRB5O75023 590 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 PRPF40AO75400 957 aaKnown RBP25.51■■□□□ 1.67
RAB40C-209ENST00000565511 F13A1P00488 732 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 HOXC13P31276 330 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 RBP5P82980 135 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 SMARCB1Q12824 385 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 FAM26FQ5R3K3 315 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 Q6ZS52 159 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 LIMS2Q7Z4I7 341 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 ADGRF2Q8IZF7 708 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 CSGALNACT1Q8TDX6 532 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 LEO1Q8WVC0 666 aaPredicted RBP25.51■■□□□ 1.67
RAB40C-209ENST00000565511 KBTBD7Q8WVZ9 684 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 C7orf25Q9BPX7 421 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 ACBD6Q9BR61 282 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 GZF1Q9H116 711 aaPredicted RBP25.51■■□□□ 1.67
RAB40C-209ENST00000565511 CUEDC2Q9H467 287 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 C2orf42Q9NWW7 574 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 OBP2AQ9NY56 170 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 GTF3C4Q9UKN8 822 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 PCDHGA2Q9Y5H1 932 aa25.51■■□□□ 1.67
RAB40C-209ENST00000565511 SPECC1L-ADORA2AF8WAN1 911 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 DPYSL4O14531 572 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 GABRDO14764 452 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 ATP2C2O75185 946 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 WEE1P30291 646 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 CTHP32929 405 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 SATB1Q01826 763 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 NELFCDQ8IXH7 590 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 GRAMD1CQ8IYS0 662 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 KIAA2013Q8IYS2 634 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 ZNF507Q8TCN5 953 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 SCFD1Q8WVM8 642 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 AGPAT3Q9NRZ7 376 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 ZSCAN32Q9NX65 697 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 PCDHA7Q9UN72 937 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 MAGED2Q9UNF1 606 aaPredicted RBP25.5■■□□□ 1.67
RAB40C-209ENST00000565511 NME7Q9Y5B8 376 aa25.5■■□□□ 1.67
RAB40C-209ENST00000565511 MYBPHLA2RUH7 354 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 EIF3DO15371 548 aaKnown RBP eCLIP25.49■■□□□ 1.67
RAB40C-209ENST00000565511 POLR2DO15514 142 aaKnown RBP25.49■■□□□ 1.67
RAB40C-209ENST00000565511 KPNA1P52294 538 aaPredicted RBP25.49■■□□□ 1.67
RAB40C-209ENST00000565511 TXNDC8Q6A555 127 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 CMTM8Q8IZV2 173 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 TMEM86AQ8N2M4 240 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 TOP6BLQ8N6T0 577 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 MAB21L3Q8N8X9 362 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 IQUBQ8NA54 791 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 BPIFB1Q8TDL5 484 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 USP13Q92995 863 aaPredicted RBP25.49■■□□□ 1.67
RAB40C-209ENST00000565511 CHFRQ96EP1 664 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 ANKRD36BP1Q96IX9 119 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 GCNAQ96QF7 691 aa25.49■■□□□ 1.67
RAB40C-209ENST00000565511 DNAH14Q0VDD8 3507 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-209ENST00000565511 ZNF233A6NK53 670 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 CLIC2O15247 247 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 LMO2P25791 158 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 PSMC1P62191 440 aaKnown RBP25.48■■□□□ 1.67
RAB40C-209ENST00000565511 MYL7Q01449 175 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 DMWDQ09019 674 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 TAF12Q16514 161 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 NFE2Q16621 373 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-209ENST00000565511 ARHGAP29Q52LW3 1261 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 SPRYD3Q8NCJ5 442 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 HPDLQ96IR7 371 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 CHAMP1Q96JM3 812 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 HPS4Q9NQG7 708 aa25.48■■□□□ 1.67
RAB40C-209ENST00000565511 OTOL1A6NHN0 477 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-209ENST00000565511 KIAA0391O15091 583 aaKnown RBP25.47■■□□□ 1.67
RAB40C-209ENST00000565511 NOL4O94818 638 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 CYP2J2P51589 502 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 MLLT6P55198 1093 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-209ENST00000565511 CUL4BQ13620 913 aa25.47■■□□□ 1.67
RAB40C-209ENST00000565511 PON2Q15165 354 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms