RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PIAS3Q9Y6X2 628 aa21.35■■□□□ 1.01
CLN6-206ENST00000565471 USP34Q70CQ2 3546 aa21.35■■□□□ 1.01
CLN6-206ENST00000565471 DPYSL4O14531 572 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 PCSK1P29120 753 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 CDR1P51861 262 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 SNRNP35Q16560 246 aaKnown RBP21.34■■□□□ 1.01
CLN6-206ENST00000565471 C1orf228Q6PIY5 440 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 HS2ST1Q7LGA3 356 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 LIMS2Q7Z4I7 341 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 OSTM1Q86WC4 334 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 ADGRF2Q8IZF7 708 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 CSGALNACT1Q8TDX6 532 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 FAM3CQ92520 227 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 HPDLQ96IR7 371 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 BLZF1Q9H2G9 400 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 CGNQ9P2M7 1197 aaKnown RBP21.34■■□□□ 1.01
CLN6-206ENST00000565471 R4GN57 208 aa21.34■■□□□ 1.01
CLN6-206ENST00000565471 PRPF40AO75400 957 aaKnown RBP21.33■■□□□ 1.01
CLN6-206ENST00000565471 LMNAP02545 664 aaKnown RBP21.33■■□□□ 1.01
CLN6-206ENST00000565471 CSH1P0DML2 217 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 CSH2P0DML3 217 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 HMGA1P17096 107 aaKnown RBP21.33■■□□□ 1.01
CLN6-206ENST00000565471 ACAT1P24752 427 aaKnown RBP21.33■■□□□ 1.01
CLN6-206ENST00000565471 CASP1P29466 404 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 CYP4F8P98187 520 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 SOWAHAQ2M3V2 549 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 ARHGAP29Q52LW3 1261 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 NELFCDQ8IXH7 590 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 C12orf56Q8IXR9 622 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 ADSSL1Q8N142 457 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 XXYLT1Q8NBI6 393 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 IER2Q9BTL4 223 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 PI4K2AQ9BTU6 479 aa21.33■■□□□ 1.01
CLN6-206ENST00000565471 F5P12259 2224 aa21.32■■□□□ 1
CLN6-206ENST00000565471 SOBPA7XYQ1 873 aa21.32■■□□□ 1
CLN6-206ENST00000565471 SLFN14P0C7P3 912 aa21.32■■□□□ 1
CLN6-206ENST00000565471 DDX6P26196 483 aaKnown RBP eCLIP21.32■■□□□ 12e-8■■□□□ 11.6
CLN6-206ENST00000565471 AFMP43652 599 aa21.32■■□□□ 1
CLN6-206ENST00000565471 NLRP12P59046 1061 aa21.32■■□□□ 1
CLN6-206ENST00000565471 RPL10AP62906 217 aaKnown RBP21.32■■□□□ 1
CLN6-206ENST00000565471 CUL4BQ13620 913 aa21.32■■□□□ 1
CLN6-206ENST00000565471 PSMD6Q15008 389 aa21.32■■□□□ 1
CLN6-206ENST00000565471 CFAP221Q4G0U5 840 aa21.32■■□□□ 1
CLN6-206ENST00000565471 MAMSTRQ6ZN01 415 aa21.32■■□□□ 1
CLN6-206ENST00000565471 TMEM150AQ86TG1 271 aa21.32■■□□□ 1
CLN6-206ENST00000565471 CEP57L1Q8IYX8 460 aa21.32■■□□□ 1
CLN6-206ENST00000565471 SPRYD3Q8NCJ5 442 aa21.32■■□□□ 1
CLN6-206ENST00000565471 FUBP3Q96I24 572 aaKnown RBP eCLIP21.32■■□□□ 1
CLN6-206ENST00000565471 LRRC3BQ96PB8 259 aa21.32■■□□□ 1
CLN6-206ENST00000565471 SLC46A2Q9BY10 475 aa21.32■■□□□ 1
CLN6-206ENST00000565471 CHRDQ9H2X0 955 aa21.32■■□□□ 1
CLN6-206ENST00000565471 C8orf33Q9H7E9 229 aaPredicted RBP21.32■■□□□ 1
CLN6-206ENST00000565471 GTF3C4Q9UKN8 822 aa21.32■■□□□ 1
CLN6-206ENST00000565471 NDRG2Q9UN36 371 aaKnown RBP21.32■■□□□ 1
CLN6-206ENST00000565471 FAM186AA6NE01 2351 aa21.32■■□□□ 1
CLN6-206ENST00000565471 CLIC2O15247 247 aa21.31■■□□□ 1
CLN6-206ENST00000565471 PRAMEF12O95522 483 aa21.31■■□□□ 1
CLN6-206ENST00000565471 F11P03951 625 aa21.31■■□□□ 1
CLN6-206ENST00000565471 GPR15P49685 360 aa21.31■■□□□ 1
CLN6-206ENST00000565471 CYP2J2P51589 502 aa21.31■■□□□ 1
CLN6-206ENST00000565471 PLCB2Q00722 1185 aa21.31■■□□□ 1
CLN6-206ENST00000565471 CYP24A1Q07973 514 aa21.31■■□□□ 1
CLN6-206ENST00000565471 TRAPPC11Q7Z392 1133 aa21.31■■□□□ 1
CLN6-206ENST00000565471 CMTM8Q8IZV2 173 aa21.31■■□□□ 1
CLN6-206ENST00000565471 BPIFB1Q8TDL5 484 aa21.31■■□□□ 1
CLN6-206ENST00000565471 KBTBD7Q8WVZ9 684 aa21.31■■□□□ 1
CLN6-206ENST00000565471 FNBP1Q96RU3 617 aa21.31■■□□□ 1
CLN6-206ENST00000565471 CGRRF1Q99675 332 aa21.31■■□□□ 1
CLN6-206ENST00000565471 SLC39A2Q9NP94 309 aa21.31■■□□□ 1
CLN6-206ENST00000565471 PRMT8Q9NR22 394 aaPredicted RBP21.31■■□□□ 1
CLN6-206ENST00000565471 UXTQ9UBK9 157 aaPredicted RBP21.31■■□□□ 1
CLN6-206ENST00000565471 DENND4CQ5VZ89 1909 aa21.31■■□□□ 1
CLN6-206ENST00000565471 RIF1Q5UIP0 2472 aaKnown RBP21.31■■□□□ 1
CLN6-206ENST00000565471 PTPRZ1P23471 2315 aaPredicted RBP21.3■■□□□ 1
CLN6-206ENST00000565471 ACTN4O43707 911 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 NOL4O94818 638 aa21.3■■□□□ 1
CLN6-206ENST00000565471 DLATP10515 647 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 TNNI1P19237 187 aa21.3■■□□□ 1
CLN6-206ENST00000565471 CCNE1P24864 410 aa21.3■■□□□ 1
CLN6-206ENST00000565471 CYP2F1P24903 491 aa21.3■■□□□ 1
CLN6-206ENST00000565471 CSTF1Q05048 431 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 MTAPQ13126 283 aa21.3■■□□□ 1
CLN6-206ENST00000565471 KNOP1Q1ED39 458 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 FAM171BQ6P995 826 aa21.3■■□□□ 1
CLN6-206ENST00000565471 SPATA2LQ8IUW3 424 aaPredicted RBP21.3■■□□□ 1
CLN6-206ENST00000565471 GPIHBP1Q8IV16 184 aa21.3■■□□□ 1
CLN6-206ENST00000565471 CELF5Q8N6W0 485 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 RDH13Q8NBN7 331 aa21.3■■□□□ 1
CLN6-206ENST00000565471 NELL1Q92832 810 aa21.3■■□□□ 1
CLN6-206ENST00000565471 TRMT2BQ96GJ1 504 aaKnown RBP21.3■■□□□ 1
CLN6-206ENST00000565471 MYRFLQ96LU7 910 aa21.3■■□□□ 1
CLN6-206ENST00000565471 SERTAD1Q9UHV2 236 aa21.3■■□□□ 1
CLN6-206ENST00000565471 CDH9Q9ULB4 789 aa21.3■■□□□ 1
CLN6-206ENST00000565471 OBSL1O75147 1896 aa21.29■■□□□ 1
CLN6-206ENST00000565471 KIF26AQ9ULI4 1882 aaPredicted RBP21.29■■□□□ 1
CLN6-206ENST00000565471 MYBPHLA2RUH7 354 aa21.29■■□□□ 1
CLN6-206ENST00000565471 HCRTO43612 131 aa21.29■■□□□ 1
CLN6-206ENST00000565471 WARSP23381 471 aaKnown RBP21.29■■□□□ 1
CLN6-206ENST00000565471 MAGEA11P43364 429 aa21.29■■□□□ 1
CLN6-206ENST00000565471 KPNA1P52294 538 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms