RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 HMGXB4Q9UGU5 601 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
SF3B3-205ENST00000564899 NOCTQ9UK39 431 aaKnown RBP11.81□□□□□ -0.52
SF3B3-205ENST00000564899 INSL6Q9Y581 213 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 TRIP11Q15643 1979 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
SF3B3-205ENST00000564899 ARHGEF37A1IGU5 675 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 F8W810 466 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 H3BNC9 293 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 I3L4J1 428 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 TBX10O75333 385 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 NDUFA10O95299 355 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 IPO7O95373 1038 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 ITGB1P05556 798 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 TNFAIP3P21580 790 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 WARSP23381 471 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 BRCC3P46736 316 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SLC11A1P49279 550 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 CDR2Q01850 454 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 HYAL1Q12794 435 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 ORC1Q13415 861 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 GPM6BQ13491 265 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 TIGD5Q53EQ6 642 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 TAF3Q5VWG9 929 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 WSCD1Q658N2 575 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 CMTR2Q8IYT2 770 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 ZNF689Q96CS4 500 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 DESI2Q9BSY9 194 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 ELOVL4Q9GZR5 314 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 RC3H2Q9HBD1 1191 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 FAM86C1Q9NVL1 165 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 EPN1Q9Y6I3 576 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-205ENST00000564899 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
SF3B3-205ENST00000564899 CACNA1AO00555 2505 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 A8MXQ7 604 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 EIF3CLB5ME19 914 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 M0QZQ0 153 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.527e-42■■■■□ 22.8
SF3B3-205ENST00000564899 NRP1O14786 923 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 GRM6O15303 877 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 THAP12O43422 761 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 TADA2AO75478 443 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 CALCAP01258 141 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 ALDH2P05091 517 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 GALTP07902 379 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 PAEPP09466 180 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 CD19P15391 556 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 RAD23BP54727 409 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 TCF15Q12870 199 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 BTG3Q14201 252 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 BMS1Q14692 1282 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SPA17Q15506 151 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SLC18A3Q16572 532 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SPOUT1Q5T280 376 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 ZNF677Q86XU0 584 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 GLYCTKQ8IVS8 523 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 TMEM86AQ8N2M4 240 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 ACRBPQ8NEB7 543 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 LNX1Q8TBB1 728 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SUSD3Q96L08 255 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 EIF3CQ99613 913 aaKnown RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 DNAI2Q9GZS0 605 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 MARCH5Q9NX47 278 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 DSEQ9UL01 958 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
SF3B3-205ENST00000564899 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-205ENST00000564899 SCN1AP35498 2009 aa11.78□□□□□ -0.52
SF3B3-205ENST00000564899 A0A087X0T9 212 aa11.78□□□□□ -0.52
SF3B3-205ENST00000564899 MBTPS2O43462 519 aa11.78□□□□□ -0.52
SF3B3-205ENST00000564899 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
SF3B3-205ENST00000564899 MMEP08473 750 aa11.78□□□□□ -0.52
SF3B3-205ENST00000564899 CCDC175P0C221 793 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms