RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 RNF208Q9H0X6 261 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 GOLPH3Q9H4A6 298 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 SYNCQ9H7C4 482 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 HMGXB4Q9UGU5 601 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 SIGLEC16A6NMB1 481 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 PODXLO00592 558 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 MGEA5O60502 916 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 CAPN2P17655 700 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 GPD2P43304 727 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 LHX1P48742 406 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 DNA2P51530 1060 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 RWDD2BP57060 319 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 FAM189BP81408 668 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-210ENST00000564587 BRD3Q15059 726 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 DCUN1D2Q6PH85 259 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 ZNF598Q86UK7 904 aaKnown RBP16.46■□□□□ 0.23
COMMD4-210ENST00000564587 ADGRF2Q8IZF7 708 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 APBB2Q92870 758 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 CYLDQ9NQC7 956 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 KANSL3Q9P2N6 904 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 TSPAN16Q9UKR8 245 aa16.46■□□□□ 0.23
COMMD4-210ENST00000564587 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 TMEM191CA6NGB0 347 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 C9IYK1 514 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 CYB561D2O14569 222 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 SPTLC1O15269 473 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 PSTPIP1O43586 416 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 ERLIN1O75477 346 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
COMMD4-210ENST00000564587 H2AFXP16104 143 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-210ENST00000564587 SCNN1GP51170 649 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 PDCLQ13371 301 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 TUSC3Q13454 348 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 PRPF38BQ5VTL8 546 aaKnown RBP16.45■□□□□ 0.22
COMMD4-210ENST00000564587 GLB1LQ6UWU2 654 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 ACOT1Q86TX2 421 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 ZDHHC17Q8IUH5 632 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 TMEM130Q8N3G9 435 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
COMMD4-210ENST00000564587 URGCPQ8TCY9 931 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 FNIP1Q8TF40 1166 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 KBTBD7Q8WVZ9 684 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 MAIP1Q8WWC4 291 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 LPPQ93052 612 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
COMMD4-210ENST00000564587 TMEM59LQ9UK28 342 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 DSEQ9UL01 958 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 RAB21Q9UL25 225 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 L1RE1Q9UN81 338 aa16.45■□□□□ 0.22
COMMD4-210ENST00000564587 GOLGA6L10A0A0M3HER8 536 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 CCDC151A5D8V7 595 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-210ENST00000564587 CETN2P41208 172 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
COMMD4-210ENST00000564587 PEX5P50542 639 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 SLC8A3P57103 927 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 PSMC1P62191 440 aaKnown RBP16.44■□□□□ 0.22
COMMD4-210ENST00000564587 ACAP1Q15027 740 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 GOLGA7BQ2TAP0 167 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 PPP1R15BQ5SWA1 713 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 WDR93Q6P2C0 686 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 DSTYKQ6XUX3 929 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 RNF169Q8NCN4 708 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 SEPT8Q92599 483 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 MS4A14Q96JA4 679 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 SENP8Q96LD8 212 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
COMMD4-210ENST00000564587 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 MIOSQ9NXC5 875 aa16.44■□□□□ 0.22
COMMD4-210ENST00000564587 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-210ENST00000564587 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 GABRDO14764 452 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 KRT3P12035 628 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 DESP17661 470 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 ACADSBP45954 432 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 BCAT1P54687 386 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 C2orf54Q08AI8 447 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 ORC1Q13415 861 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 MTFR1Q15390 333 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 UPP1Q16831 310 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 PKDCCQ504Y2 493 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 PPP1R26Q5T8A7 1209 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-210ENST00000564587 LRRC38Q5VT99 294 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 C1orf53Q5VUE5 145 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 ANKRD33Q7Z3H0 272 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 METTL23Q86XA0 190 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 ANKRD52Q8NB46 1076 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 MCRS1Q96EZ8 462 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
COMMD4-210ENST00000564587 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms