RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CD40P25942 277 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CNR2P34972 360 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 RASSF2P50749 326 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 PSMD7P51665 324 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CLCN2P51788 898 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 TNNC1P63316 161 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 IFT88Q13099 833 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 MTA1Q13330 715 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 BLMHQ13867 455 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 KARSQ15046 597 aaKnown RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 DHCR24Q15392 516 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 AMOTQ4VCS5 1084 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 TIGD7Q6NT04 549 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 FAM173BQ6P4H8 233 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 MTHFD1LQ6UB35 978 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 RTN4RL1Q86UN2 441 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 KBTBD2Q8IY47 623 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 IQCKQ8N0W5 287 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 GALNT15Q8N3T1 639 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 C7orf31Q8N865 590 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CCDC197Q8NCU1 140 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 SMC1BQ8NDV3 1235 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 MYCBPAPQ8TBZ2 947 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CHAC2Q8WUX2 184 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CHTF18Q8WVB6 975 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 LMBR1Q8WVP7 490 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 ATRIPQ8WXE1 791 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 USP7Q93009 1102 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 FERMT2Q96AC1 680 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 FOXRED1Q96CU9 486 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 C16orf92Q96LL3 132 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 RMDN2Q96LZ7 410 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 GPR101Q96P66 508 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 TRAPPC9Q96Q05 1148 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 FAM129AQ9BZQ8 928 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 TRIM7Q9C029 511 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 HSD3B7Q9H2F3 369 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 CAAP1Q9H8G2 361 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 GPR108Q9NPR9 543 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 C9orf78Q9NZ63 289 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 ADD3Q9UEY8 706 aaKnown RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 CIDEBQ9UHD4 219 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 HYOU1Q9Y4L1 999 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 GMEB1Q9Y692 573 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 ARID1BQ8NFD5 2236 aaPredicted RBP6.04□□□□□ -1.44
CHD9-210ENST00000564582 ABCC6O95255 1503 aa6.04□□□□□ -1.44
CHD9-210ENST00000564582 MLH3Q9UHC1 1453 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 UTYO14607 1347 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 STK36Q9NRP7 1315 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 A0A0G2JLL6 359 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 A0A0G2JNJ9 132 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 B4DLN1 442 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 AGPSO00116 658 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 TRAPPC3O43617 180 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 MAFO75444 373 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 FGFR1OPO95684 399 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 PRLP01236 227 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 HMGCRP04035 888 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 ATP1A3P13637 1013 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 ALADP13716 330 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 PAX7P23759 505 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 PTX3P26022 381 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 PDIA3P30101 505 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 STAT3P40763 770 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 PEX19P40855 299 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 ETV4P43268 484 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 LSSP48449 732 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 ADKP55263 362 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 SLC6A3Q01959 620 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 CEBPZQ03701 1054 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 STK3Q13188 491 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 TOP3AQ13472 1001 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 CUL3Q13618 768 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 USP10Q14694 798 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 SEPT7Q16181 437 aaKnown RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 PLEKHO1Q53GL0 409 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 ANKRD20A8PQ5CZ79 823 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 TTC39AQ5SRH9 613 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 CCDC122Q5T0U0 273 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 EGFLAMQ63HQ2 1017 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 GRAMD4Q6IC98 578 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 SLFN12LQ6IEE8 588 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 SULT6B1Q6IMI4 303 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 MIS18BP1Q6P0N0 1132 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 CPLX4Q7Z7G2 160 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 AACSQ86V21 672 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 HOOK3Q86VS8 718 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 PHYKPLQ8IUZ5 450 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 TMTC2Q8N394 836 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 CCDC63Q8NA47 563 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 RASSF8Q8NHQ8 419 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 FAM81AQ8TBF8 368 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 SMCR8Q8TEV9 937 aaPredicted RBP6.03□□□□□ -1.44
CHD9-210ENST00000564582 CYFIP2Q96F07 1278 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 SCLT1Q96NL6 688 aa6.03□□□□□ -1.44
CHD9-210ENST00000564582 TUBGCP5Q96RT8 1024 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms